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Table 2 Associations of SNP in dystrophin with the stress response

From: A defect in dystrophin causes a novel porcine stress syndrome

SNP dbSNP# Basepaira A1b F_Ac F_U A2 P-value -Log(p)
84116_121 ss410758942 26546329 A 0 0.1977 G 0.000245 3.6117
84102_437 ss410758941 26635210 T 0 0.1837 C 0.001723 2.7637
85904_613 ss410758951 27322071 T 0.03509 0.1886 C 0.004925 2.3076
85890_783 ss410758971 28023949 C 0 0.7485 T 1.06E-23 22.9759
ALGA0099514 rs80929421 27689253 C 0 0.7401 T 2.19E-23 22.6605
ALGA0099513 rs80914436 27716318 C 0 0.7401 T 2.19E-23 22.6605
85896_775 ss410758960 27762149 T 0 0.1579 A 0.001687 2.7729
84024_171 ss410758936 27786935 C 0 0.1598 A 0.00143 2.8447
85894_336 ss410758939 27840323 A 0 0.4971 C 1.28E-11 10.8935
84339_200 ss410758953 27922373 G 0 0.01163 A 0.4055 0.3920
84008_345 ss410758980 27922512 A 0 0.1579 G 0.001535 2.8139
84339_333 ss410758954 27934448 A 0 0.005848 G 0.5594 0.2523
84002_411 ss410758948 27942562 C 0 0.2059 G 0.000195 3.7091
84000_82 ss410758968 28119423 G 0 0.1471 A 0.001967 2.7062
85413_679 ss410758963 28465839 C 0 0.02013 T 0.2848 0.5455
85413_571 ss410758964 28465948 A 0 0.00578 G 0.5617 0.2505
85404_372 ss410758935 28517880 - 0 0.2073 A 0.000239 3.6220
  1. aMap position is based on SGSC Sscrofa build 9.2.
  2. bA1 and A2 represent the different alleles.
  3. cF_A is the frequency of allele 1 in cases and F_U is the frequency of A1 in unaffected.