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Table 3 Distribution of the genotyped SNPs in contigs

From: Development and characterisation of an expressed sequence tags (EST)-derived single nucleotide polymorphisms (SNPs) resource in rainbow trout

Number of SNPs/contig Number of SNPs in:
Validation Panel Successfully genotyped Monomorphic Heterozygous True
1 151 133 34 13 86
2 154 126 39 21 66
3 141 115 34 24 57
4 98 79 30 20 29
5 91 69 25 20 24
6 81 72 24 30 18
7 70 53 29 14 10
8 48 39 18 11 10
9 45 40 19 12 9
10 38 29 7 12 10
> 10 235 203 87 85 31
Total 1152 958 346 262 350
  1. The number of SNPs identified within each contig type were summarized for the validation panel and for successfully genotyped, monomorphic, heterozygous and for true SNPs.