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Table 1 Average r2 at various distances in four breeds

From: Estimation of linkage disequilibrium in four US pig breeds

Breed

Adj.1

0.5 Mb2

1 Mb2

5 Mb2

Duroc

0.46

0.26

0.19

0.06

Hampshire

0.44

0.25

0.20

0.08

Landrace

0.36

0.19

0.15

0.06

Yorkshire

0.39

0.21

0.16

0.05

  1. 1Average r2 for SNP with adjacent map positions (exact spacing: 70 kb for Duroc, 74 kb for Hampshire, 60 kb for Landrace, and 61 kb Yorkshire).
  2. 2Average r2 for SNP spaced 0.5 Mb, 1 Mb and 5 Mb apart
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BMC Genomics

ISSN: 1471-2164

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