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Table 1 Summary of MeDIP-seq experimental results.

From: Dynamic DNA cytosine methylation in the Populus trichocarpa genome: tissue-level variation and relationship to gene expression

Tissue Biological Replicates Platform Lanes Sequenced Total Reads (Illumina Yield) No. Mapped Reads Percent Mapped Reads
Spring bud 2 GAII 5 97,642,336 8,880,982 9.1
Autumn bud 1 GAII 3 27,397,024 10,836,547 39.6
Winter bud 1 GAII 3 26,301,421 9,734,237 37
Male catkin 2 GAII 5 78,702,151 24,870,095 31.6
Female catkin 2 GAII 5 63,861,351 17,212,810 27
Leaf 2 GA 4 70,264,008 13,524,682 19.2
Root 2 GA 5 81,017,743 9,284,891 11.5
Phloem 2 GAII 4 38,358,479 22,737,382 59.3
Xylem 1 GAII 5 33,649,277 12,278,525 36.5
   Totals 39 517,193,790 129,360,151  
  1. Mapped reads include all non-clonal reads, allowing up to two mismatches.