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Table 2 CD-epitope cores derived from γ-gliadins

From: Celiac disease T-cell epitopes from gamma-gliadins: immunoreactivity depends on the genome of origin, transcript frequency, and flanking protein variation

epitope

new epitope nomenclature**

9-mer core

DQ2-γ-VIIb3*

DQ2.5-glia-γ4c

Q QPQ QPFPQ

DQ2-γ-VI3

DQ2.5-glia-γ5

Q QPFPQ QPQ

DQ2.5-glia-γ2a6

x

FPQ QPQ QPF

DQ2-γ-II(Glia γ30)3,4

DQ2.5-glia-γ2

IQPQ QPAQL

DQ2-γ-I (Glia-γ1)2

DQ2.5-glia-γ1

PQ QSFPQQQ

DQ2-γ-VIIa3

DQ2.5-glia-γ4b

PQPQ QQ FPQ

DQ2-γ-IV5

DQ2.5-glia-γ4a

SQPQ QQ FPQ

DQ2-γ-III5*

DQ2.5-glia-γ3

Q QPQ QPYPQ

DQ2-glia-γ2b6

x

YPQ QPQ QPF

  1. CD-epitope cores (9-mer binding cores) derived from γ-gliadins. The targets for tTG deamidation are depicted in bold underlined. 2Sjöström et al. [17], 3Qiao et al.[7], 4Vader et al.[22], 5Arentz-Hansen et al [19], 6Stepniak et al.[21]. *deamidation dependent epitope, Q QPQ QPF/YPQ, deamidation at position 4 is HLA-DQ2 restricted and deamidation at positions 1 and 9, Q QPQ QP(F/Y)PQ is HLA-DQ8 [8]; the same counts for DQ2-γ-VI (Q QPFPQ QPQ), in case of deamidation at P1 and P9 this epitope is HLA-DQ8 restricted [9]. ** Nomenclature and listing of celiac disease relevant gluten T-cell epitopes (Sollid et al. [55]).