Table 2 Alignment results of ESTs on the different cDNA references and genomes
Species name | Target type | Original ESTs | Assembled and singleton ESTs | ||||
|---|---|---|---|---|---|---|---|
| Â | Â | a.e. | m.t. | m.g. | a.e. | m.t. | m.g. |
C. jacchus | cDNA ref. | 24,461 (64.73%) | 5,951 | 5,051 | 5,954 (41.31%) | 4,928 | 4,504 |
G. gorilla | cDNA ref. | 23,633 (62.54%) | 5,162 | 4,948 | 6,008 (41.69%) | 4,622 | 4,527 |
H. sapiens | cDNA ref. | 30,117 (79.70%) | 9,208 | 6,529 | 8,708 (60.43%) | 7,316 | 6,128 |
M. mulatta | cDNA ref. | 24,213 (64.07%) | 5,439 | 4,763 | 5,657 (39,25%) | 4,585 | 4,273 |
M. murinus | cDNA ref. | 8,618 (22.80%) | 1,770 | 1,770 | 1,240 (08.60%) | 1,138 | 1,138 |
N. leucogeny | cDNA ref. | 22,600 (59.80%) | 4,949 | 4,749 | 5,672 (39.36%) | 4,389 | 4,296 |
O. garnettii | cDNA ref. | 7,564 (20.01%) | 1,431 | 1,431 | 930 (06.45%) | 861 | 861 |
P. troglodytes | cDNA ref. | 25,196 (66.67%) | 5,699 | 5,156 | 6,332 (43.94%) | 5,012 | 4,756 |
P. abelii | cDNA ref. | 18,904 (50.02%) | 4,149 | 3,989 | 4,274 (29.65%) | 3,415 | 3,340 |
T. syrichta | cDNA ref. | 5,327 (14.09%) | 1,348 | 1,346 | 908 (06.30%) | 854 | 854 |
C. sabaeus | d. scaf. | 37,409 (98.99%) | – | – | 14,139 (98,11%) | – | – |
M. fascicularis | d. assem. | 35,686 (94,44%) | – | – | 13,392 (92.93%) | – | – |