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Table 2 Alignment results of ESTs on the different cDNA references and genomes

From: Expression sequence tag library derived from peripheral blood mononuclear cells of the chlorocebus sabaeus

Species name

Target type

Original ESTs

Assembled and singleton ESTs

  

a.e.

m.t.

m.g.

a.e.

m.t.

m.g.

C. jacchus

cDNA ref.

24,461 (64.73%)

5,951

5,051

5,954 (41.31%)

4,928

4,504

G. gorilla

cDNA ref.

23,633 (62.54%)

5,162

4,948

6,008 (41.69%)

4,622

4,527

H. sapiens

cDNA ref.

30,117 (79.70%)

9,208

6,529

8,708 (60.43%)

7,316

6,128

M. mulatta

cDNA ref.

24,213 (64.07%)

5,439

4,763

5,657 (39,25%)

4,585

4,273

M. murinus

cDNA ref.

8,618 (22.80%)

1,770

1,770

1,240 (08.60%)

1,138

1,138

N. leucogeny

cDNA ref.

22,600 (59.80%)

4,949

4,749

5,672 (39.36%)

4,389

4,296

O. garnettii

cDNA ref.

7,564 (20.01%)

1,431

1,431

930 (06.45%)

861

861

P. troglodytes

cDNA ref.

25,196 (66.67%)

5,699

5,156

6,332 (43.94%)

5,012

4,756

P. abelii

cDNA ref.

18,904 (50.02%)

4,149

3,989

4,274 (29.65%)

3,415

3,340

T. syrichta

cDNA ref.

5,327 (14.09%)

1,348

1,346

908 (06.30%)

854

854

C. sabaeus

d. scaf.

37,409 (98.99%)

14,139 (98,11%)

M. fascicularis

d. assem.

35,686 (94,44%)

13,392 (92.93%)

  1. For both the 37,787 originals ESTs and the 14,410 distinct transcripts, the number of aligned ESTs (a.e.) on the cDNA references (cDNA ref.), draft scaffold genome (d. scaf.), and draft assembly genome (d. assem.) are indicated. The number of mapped transcripts (m.t.) and mapped genes (m.g.) are also indicated for the cDNA references.