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Table 1 Sequence and assembly output

From: Transcriptome characterization via 454 pyrosequencing of the annelid Pristina leidyi, an emerging model for studying the evolution of regeneration

454 sequencing results

# reads

1,550,174

mean read length

376 nt

# nucleotides

583,020,992

  

Newbler Assembler v2.3 assembly results

# contigs

186,015

  

# isotigs

95,644

mean isotig length

707 nt

  

mean max isotig length

549 nt

# isogroups

64,522

  

# singletons

46,679

  

# unigenes

111,201

  

fraction captured transcripts

 

0.9699

 

gene discovery rate

 

33.21 reads/new gene

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