Table 3 DGE data description for the four rice samples
Sample | Japonica | Indica | O. rufipogon | O. nivara |
|---|---|---|---|---|
Raw/distinct tag number | 7,662,276/648,947 | 7,418,013/562,392 | 7,774,577/561,691 | 7,343,629/599,304 |
Total/distinct tag number used in analysis | 7,589,226/612,176 | 7,413,872/558,498 | 7,769,442/556,909 | 7,334,416/591,759 |
Genes with CATG sites | 24,611 (98.62%) | 24,611 (98.62%) | 24,611 (98.62%) | 24,611 (98.62%) |
Tags with perfect match to unique gene | 4,729,194 | 4,295,776 | 4,579,715 | 4,162,572 |
Genes with perfect match to unique tags | 20,682 (82.88%) | 19,804 (79.36%) | 20,095 (80.52%) | 19,745 (79.12%) |