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Table 5 Comparison of miRNA target annotations between the Williams and Heinong44 data sets

From: Identification of soybean seed developmental stage-specific and tissue-specific miRNA targets by degradome sequencing

Annotations Unique to Williams Annotations Unique to Heinong44 Annotations Found in Both Data Sets
Alcohol/Zinc-binding dehydrogenase Polyubiquitin protein AGO protein
Alg9-like mannosyltransferase Plasmamembrane protein Auxin Response Factor
Aluminium induced protein Auxin signaling F-BOX protein Copper/zinc superoxide dismutase
Anion Exchange protein NADP+ Growth Regulating Factor
Ankyrin repeat containing protein MtN19-like protein HD-ZIP Transcription Factor
Ataxin-2 domain containing protein Serine-type endopeptidase MYB family Transcription Factor
bHLH family protein elongation factor No Apical Meristem protein (NAC Family)
BRE Expressed protein NSF attachment protein SBP domain containing protein
BTB/POZ domain containing protein Autophagy protein TCP family transcription factor
Calcineurin-like phosphoesterase embryo-related protein Nuclear Factor-YA
Cellulose synthase AP2 transcription factor Zinc Finger Family protein
Cyclin family protein heat shock cognate protein  
Dynamin family protein expressed protein  
EF-hand containing protein 60 S ribosomal protein  
Elongation Factor S-II Disulfide isomerase  
F-box domain containing protein FAD linked oxidase family protein  
Ferredoxin related protein Auxin inducible transcription factor  
Glyoxal oxidase related protein ribulose-1,5-bisphosphate carboxylase  
GTPase-activating protein   
Integrase domain containing protein   
lectin domain containing protein   
LRR containing protein   
mRNA capping enzyme   
NADP/FAD oxidoreductase   
NB-ARC domain containing protein   
No Functional Annotation   
PAZ domain containing protein   
Peptide transporter family protein   
Permease family protein   
PPR repeat containing protein   
Protein tyrosine kinase   
Putative methyltransferase   
Ras family protein   
Ribose 5-phosphate isomerase   
Serine protease inhibitor family   
Serine-threonine protein kinase   
START Domain containing protein   
TIR domain containing protein   
Transcription factor TFIID   
Transferase family protein   
Transmembrane protein 14 C   
Transporter family protein   
UBA domain containing protein   
Ubiquitin-protein ligase   
Uncharacterized conserved protein   
Universal stress protein family   
  1. Williams data sets from this study were generated using five degradome libraries of early, mid and late soybean seed developmental stage. The Heinong44 data set represented an earlier seed stage [21].