Mapping the polysaccharide degradation potential of Aspergillus niger

BMC Genomics

Table 1 Extract of Additional file 17 : Table S6 of the enzymatic activities required for the degradation of soluble galactoglucomannan by A. niger

EC number	Name	CAZy	Gene characterization	Specificity	Gene	Uniprot	CBS 513.88	ATCC 1015
3.2.1.78	Endo-1,4-β-D-mannanase	GH5	[22]	[22]			An05g01320	50378
3.2.1.78	Endo-1,4-β-D-mannanase	GH26					An15g07760	40875
3.2.1.25	β-mannosidase	GH2					An01g06630	172587
3.2.1.25	β-mannosidase	GH2	[23–25]	[23, 24]	mndA	Q9UUZ3	An11g06540	138876
3.2.1.22	α-galactosidase	GH36	[24, 26]	[24]	aglC	Q9UUZ4	An09g00260	212736
3.2.1.22	α-galactosidase	GH27					An01g01320	172232
3.2.1.22	α-galactosidase	GH27	[26, 27]		aglB	Q9Y865	An02g11150	207264
3.2.1.22	α-galactosidase	GH27	[26, 28, 29]		aglA	A2QL72	An06g00170	37736
3.2.1.21	β-glucosidase	GH3					An15g04800	181816
3.2.1.21	β-glucosidase	GH3					An17g00520	129891
3.2.1.21	β-glucosidase	GH3	[30–36]		bgl1	A2RAL4	An18g03570	56782
3.2.1.23	β-galactosidase	GH35					An01g10350	46429
3.2.1.23	β-galactosidase	GH35					An14g05820	41910
3.2.1.23	β-galactosidase	GH35	[26]		lacA	P29853	An01g12150	51764
3.1.1.6	Acetyl esterase	CE16					An02g02540	N/A

For each isoenzyme, putative or characterized, is noted literature references and the gene ID in the sequencings of A. niger CBS 513.88 and ATCC 1015. CAZy families are shown in the CAZy columnn [37], The list of necessary enzymes are gathered from the work described in refs. [18–21].

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