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Table 1 Statistically significant KEGG classifications of differentially expressed genes

From: RNA-seq liver transcriptome analysis reveals an activated MHC-I pathway and an inhibited MHC-II pathway at the early stage of vaccine immunization in zebrafish

KEGG subcategories Counts %* p-value
Ribosome 70 1.53 9.60E-14
Proteasome 35 0.77 1.80E-13
Protein processing in endoplasmic reticulum 81 1.77 2.27E-10
Arginine and proline metabolism 27 0.59 2.26E-04
Primary bile acid biosynthesis 10 0.22 8.23E-04
Fructose and mannose metabolism 18 0.39 2.44E-03
Glycolysis/Gluconeogenesis 27 0.59 3.47E-03
N-Glycan biosynthesis 22 0.48 3.71E-03
Glycine, serine and threonine metabolism 15 0.33 1.64E-02
Galactose metabolism 13 0.28 2.23E-02
Histidine metabolism 12 0.26 4.02E-02
Peroxisome 27 0.59 4.50E-02
Propanoate metabolism 13 0.28 4.84E-02
Protein export 13 0.28 4.96E-02
  1. * indicates the percentage of genes in each pathway from 3467 genes mapped to KEGG.