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Table 1 Statistically significant KEGG classifications of differentially expressed genes

From: RNA-seq liver transcriptome analysis reveals an activated MHC-I pathway and an inhibited MHC-II pathway at the early stage of vaccine immunization in zebrafish

KEGG subcategories

Counts

%*

p-value

Ribosome

70

1.53

9.60E-14

Proteasome

35

0.77

1.80E-13

Protein processing in endoplasmic reticulum

81

1.77

2.27E-10

Arginine and proline metabolism

27

0.59

2.26E-04

Primary bile acid biosynthesis

10

0.22

8.23E-04

Fructose and mannose metabolism

18

0.39

2.44E-03

Glycolysis/Gluconeogenesis

27

0.59

3.47E-03

N-Glycan biosynthesis

22

0.48

3.71E-03

Glycine, serine and threonine metabolism

15

0.33

1.64E-02

Galactose metabolism

13

0.28

2.23E-02

Histidine metabolism

12

0.26

4.02E-02

Peroxisome

27

0.59

4.50E-02

Propanoate metabolism

13

0.28

4.84E-02

Protein export

13

0.28

4.96E-02

  1. * indicates the percentage of genes in each pathway from 3467 genes mapped to KEGG.
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BMC Genomics

ISSN: 1471-2164

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