miRNA | Length of mature(nt) | Sequence(5′–3′) | Counts of miRNAs/miRNA*s | Location | Length of precursors(nt) | Arm | MFE (kcal/mol) |
---|---|---|---|---|---|---|---|
miR6257 | 21 | TCTTAACTGTTGGATTAGGCT | 22/1 | scaffold_10:708566:708677:− | 112 | 5′ | −26.7 |
miR6258 | 21 | TTCCAGCTGTAAAGATCAAGA | 5/5 | scaffold_1:230373:230544:+ | 172 | 5′ | −88.7 |
miR6259 | 21 | TAGAAAAATACGGGCGATAAA | 6/1 | scaffold_1:37406755:37406880:+ | 126 | 3′ | −53.6 |
miR6260 | 21 | TGGAGTGAGAGAATGGGAGGT | 14/2 | scaffold_1:40569695:40569796:+ | 102 | 3′ | −50.4 |
miR6261 | 22 | AAGTGATTATATGGAGAAGCAC | 13/1 | scaffold_1:46392103:46392176:+ | 74 | 3′ | −26.5 |
miR6262 | 21 | TCTTTAGAAAGTTAGAATTGT | 5/1 | scaffold_1:23904565:23904750:− | 186 | 5′ | −67 |
miR6263 | 21 | AAGTGGACAAAAGGGGAGTGG | 16/2 | scaffold_2:16774627:16774733:+ | 107 | 3′ | −24.9 |
miR6264 | 21 | ATGCCTATGGACACGTGTCAA | 6/1 | scaffold_2:10473541:10473644:− | 104 | 3′ | −56.02 |
miR6265 | 23 | TTGAACTTTGACCCGATTCGCAT | 15/1 | scaffold_3:13798983:13799084:+ | 102 | 5′ | −36.77 |
miR6266a | 21 | TAAATGCAGGGGCAAAATGAT | 149/4 | scaffold_4:6953607:6953883:+ | 277 | 5′ | −69.81 |
miR6266b | 21 | TAAATGCAGGGGCAAAATGAT | 109/2 | scaffold_4:8221370:8221603:+ | 234 | 5′ | −60.63 |
miR6266c | 21 | TAAATGCAGGGGCAAAATGAT | 106/1 | scaffold_7:12665062:12665327:− | 266 | 5′ | −59.43 |
miR6267a | 21 | TAGAGAGGTGGTACAATTGTG | 45/1 | scaffold_4:9720663:9720766:+ | 104 | 3′ | −69.6 |
miR6267b | 21 | ATTAGAGAGGCGGTAAACAAT | 5/1 | scaffold_4:13686619:13686731:− | 113 | 3′ | −35.9 |
miR6268 | 21 | TGAGGAGATGGAGAGTAGATA | 244/3 | scaffold_4:16645739:16645874:+ | 136 | 5′ | −77.7 |
miR6269 | 21 | TGTGAATAGTGATTGCCATGG | 18/5 | scaffold_4:20136895:20136989:+ | 95 | 5′ | −36.7 |
miR6270 | 21 | TTCTGGTATTGGAATTTCATT | 259/26 | scaffold_4:30105651:30106027:+ | 377 | 3′ | −117.7 |
miR6271 | 21 | TCAAGATTGAGAGATATAATG | 24/3 | scaffold_4:8916468:8916590:− | 123 | 3′ | −34.3 |
miR6272 | 21 | TAGCTGTAAATGAGTGTTTTT | 5/1 | scaffold_4:19289821:19289925:− | 105 | 5′ | −25.8 |
miR6273 | 21 | AATGCAGCATGATTTTTTTTT | 81/63 | scaffold_5:3421010:3421132:+ | 123 | 3′ | −42.2 |
miR6274 | 23 | TATTTTGCTATCTTCGGGCAATA | 15/2 | scaffold_5:3414706:3414834:− | 129 | 5′ | −35.8 |
miR6275 | 22 | AGTGGAAGTAGCAAGGGGAAGC | 14/1 | scaffold_5:10005396:10005502:− | 107 | 3′ | −67.6 |
miR6276 | 21 | AAAGGCTCATACAAATATTCC | 14/3 | scaffold_6:8093383:8093491:− | 109 | 5′ | −21.7 |
miR6277 | 21 | TGTGTGTGGAAAGAGCGAGAC | 1661/5 | scaffold_6:28212589:28212684:− | 96 | 3′ | −47.16 |
miR6278 | 22 | TGAACCTTGTGTACAAATTGGC | 16/3 | scaffold_7:7789275:7789372:+ | 98 | 3′ | −41.9 |
miR6279 | 21 | TAGACAAGAATTCCAGAGACC | 9/1 | scaffold_7:16179849:16180001:+ | 153 | 3′ | −31.4 |
miR6280 | 21 | TTGGCAGTAAGATTTTTGGTG | 15/2 | scaffold_7:8897336:8897500:− | 165 | 5′ | −42.1 |
miR6281 | 21 | GTTAGAGATAGAGAGAGTGAG | 60/21 | scaffold_8:277682:277841:+ | 160 | 5′ | −86 |
miR6282 | 23 | GTTGATCGATGTGGGATGTTACA | 8/1 | scaffold_8:11190431:11190772:+ | 342 | 5′ | −93.3 |
miR6283 | 21 | CAAAAGGGGAGTGGGAAAATC | 33/2 | scaffold_8:19627180:19627307:+ | 128 | 3′ | −64.9 |
miR6284 | 21 | TTTGGACCATGGATGAAGATT | 5128/2 | scaffold_8:20948100:20948196:+ | 97 | 3′ | −31.9 |
miR6285 | 22 | TAGTGAAGTTTGAATTAGGGCT | 2195/3 | scaffold_8:16684630:16684710:− | 81 | 5′ | −38 |
miR6286 | 23 | TTTGAACCATTGGATCGTAGTTA | 8/1 | scaffold_14:309411:309508:− | 98 | 5′ | −21.8 |
miR6287 | 21 | CAAGAAGTGGAAGTTTTGGGC | 5/1 | scaffold_1:17236128:17236204:− | 77 | 5′ | −31.3 |
miR6288 | 21 | GAAAATGACAAGTGGCTAGTT | 27/13 | scaffold_2:18743450:18743549:+ | 100 | 3′ | −51.3 |
miR6289 | 21 | TCCTTTGAATGGTTAGGCTCA | 7/1 | scaffold_3:4077260:4077364:− | 105 | 3′ | −51.2 |
miR6290 | 23 | TGAATGAGTTCAGAGATCGTGTA | 17/12 | scaffold_4:28016862:28016957:+ | 96 | 3′ | −18.7 |
miR6291a | 21 | CTTACCACATTTTTATACCAT | 67/1 | scaffold_4:8758152:8758281:− | 130 | 5′ | −66.31 |
miR6291b | 21 | CTTACCACATTTTTATACCAT | 67/4 | scaffold_7:5853383:5853533:+ | 151 | 5′ | −41.6 |
miR6292 | 21 | TATCTTTTAATCGTTAGATCA | 18/1 | scaffold_4:11582347:11582421:− | 75 | 5′ | −29.99 |
miR6293 | 21 | TAAGAGGCTGATGACTAAAAC | 355/9 | scaffold_5:2922263:2922370:+ | 107 | 5′ | −59.8 |
miR6294 | 21 | TGGTGTAGGCTAATCACAATC | 7/1 | scaffold_5:18324006:18324209:+ | 204 | 3′ | −89.9 |
miR6295 | 21 | GAGGACAGAAGATGATTCAGC | 42/10 | scaffold_6:25684504:25684833:+ | 330 | 3′ | −155.3 |
miR6296 | 21 | TAAGGCCCTTAGATGAGACCC | 10/1 | scaffold_6:28262446:28262576:+ | 131 | 3′ | −56 |
miR6297a | 23 | AATAATTTTTCGTCGCGCAAAAT | 10/1 | scaffold_8:6395625:6395769:+ | 145 | 3′ | −63.2 |
miR6297b | 23 | GATGTATTGTCGTCGCGCAAAGT | 11/11 | scaffold_8:2802801:2802903:− | 103 | 3′ | −54.6 |
miR171a | 21 | TGATTGAGCCGTGCCAATATC | 1651/29 | scaffold_3:16557250:16557364:+ | 115 | 3′ | −58.4 |
miR171c | 21 | TGATTGAGCCGTGCCAATATC | 1586/1 | scaffold_3:21505898:21505996:− | 99 | 3′ | −46.3 |
miR171e | 21 | TTATTGAACCGGACCAATATC | 10/1 | scaffold_3:16557258:16557354:− | 97 | 3′ | −39.8 |
miR171g | 21 | TGATTGAGCCGTGCCAATATC | 3634/3 | scaffold_5:13607844:13607938:− | 95 | 3′ | −46.5 |
miR171h | 21 | TTGAGCCGCGTCAATATCTCC | 1141/43 | scaffold_3:16525596:16525722:+ | 127 | 3′ | −44.32 |
miR319b | 22 | TAGCTGCCGAGTCATTCATCCA | 71/30 | scaffold_5:11602974:11603095:− | 122 | 5′ | −49.26 |
miR394 | 21 | AAGCGTTTCTTACAGAGTTTA | 130/4 | scaffold_1:32136105:32136248:− | 144 | 5′ | −65 |
miR477a | 21 | GTTGGGGGCTCTTTTGGGACG | 161/28 | scaffold_3:9747726:9747847:− | 122 | 3′ | −58.5 |
miR477b | 21 | GTTGGGGGCTCTTTTGGGACG | 161/28 | scaffold_3:9752784:9752905:− | 122 | 3′ | −62.1 |
miR482a | 22 | TTTCCGAAACCTCCCATTCCAA | 1293/75 | scaffold_1:29646062:29646181:+ | 120 | 3′ | −47.2 |
miR482b | 22 | CTTCCCAAACCTCCCATTCCTA | 4677/518 | scaffold_1:29648520:29648655:+ | 136 | 3′ | −55.5 |
miR482c | 20 | GGAATGGGCTGTTTGGGATG | 30342/30319 | scaffold_3:10579287:10579407:+ | 121 | 5′ | −63.6 |
miR482d | 22 | CCTCCCATGCCACGCATTTCTA | 20734/3022 | scaffold_8:10608388:10608531:− | 144 | 3′ | −59.3 |
miR482e | 22 | TTGCCTATTCCTCCCATGCCAA | 210/2 | scaffold_1:29646743:29646870:+ | 128 | 3′ | −55 |
miR828 | 21 | TCATTTCAGCAAGCAGCGTTA | 1491/1 | scaffold_2:25971195:25971319:− | 125 | 3′ | −55.9 |