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Table 4 Expression data of predicted conidiation genes

From: The carbon starvation response of Aspergillus niger during submerged cultivation: Insights from the transcriptome and secretome

    Expressiona   Fold changesb   FDR q-valuesb
ORF Gene (Predicted) function Expc Day 1 Day 3 Day 6   Day 1 Day 3 Day 6   Day 1 Day 3 Day 6
Fluffy genes
An14g03390 fluG Synthesis of small extracellular factor 1.9 1.0 1.3 1.8   0.5 0.7 0.9   3.1E-08 3.7E-05 3.0E-01
An02g03160 flbA Regulator of G-protein signalling 0.9 0.8 0.9 1.2   0.9 1.0 1.4   3.3E-01 7.9E-01 5.4E-04
An15g03710 flbB Transcription factor 2.6 2.5 2.1 2.5   1.0 0.8 1.0   6.6E-01 3.6E-02 7.8E-01
An02g05420 flbC Transcription factor 1.1 2.4 4.5 8.2   2.1 4.0 7.2   4.0E-05 3.3E-08 5.1E-10
An01g04830 flbD Transcription factor 1.3 8.2 6.3 9.0   6.3 4.8 6.9   1.0E-09 7.3E-09 6.2E-10
An08g07210 flbE Activator functionally associated with FlbB 1.9 2.0 3.4 4.5   1.1 1.8 2.4   3.7E-01 2.3E-06 2.7E-08
An08g06130 fadA Heterotrimeric G-protein α-subunit 15.2 18.8 18.4 19.8   1.2 1.2 1.3   2.0E-03 4.0E-03 2.6E-04
Conidiophore development
An01g10540 brlA Transcription factor 0.4 0.4 13.4 17.0   1.1 37.0 46.8   8.5E-01 3.5E-10 1.7E-10
An01g03750 abaA Transcription factor 1.1 1.0 14.1 31.9   0.9 12.6 28.6   1.7E-01 3.1E-12 1.3E-13
An01g08900 wetA Transcription factor 0.8 0.8 1.5 4.2   0.9 1.8 5.1   4.6E-01 5.1E-06 3.2E-11
An02g02150 medA Transcription factor 1.6 3.6 3.8 2.5   2.2 2.3 1.5   6.2E-08 2.8E-08 7.1E-05
An05g00480 stuA Transcription factor 12.5 28.0 49.7 48.7   2.2 4.0 3.9   5.3E-07 1.0E-09 1.2E-09
Pigmentation genes and hydrophobins
An03g02400 hypC Hydrophobin 0.6 0.6 261.2 333.0   1.1 436.9 557.1   8.7E-01 4.0E-10 2.4E-10
An08g09880   Hydrophobin 0.5 0.5 180.5 229.9   1.1 360.5 459.1   8.9E-01 5.0E-10 3.0E-10
An03g02360 hypB Hydrophobin 0.5 0.4 162.4 214.5   0.9 345.1 455.8   7.3E-01 5.8E-10 3.2E-10
An14g05350 olvA Hydrolase involved in pigmentation 1.6 11.1 153.3 205.4   6.8 94.2 126.2   8.2E-07 3.7E-11 1.8E-11
An01g13660 yA Laccase invovled in pigmenation 0.8 1.0 46.1 20.6   1.2 56.5 25.3   3.6E-01 2.3E-11 3.0E-10
An14g05370 brnA Multicopper oxidase involved in pigmentation 0.7 0.5 33.0 39.9   0.7 46.3 55.9   3.1E-01 1.8E-09 9.6E-10
An01g10940 hypA Hydrophobin 0.4 0.4 12.3 15.0   0.8 29.3 35.6   5.1E-01 1.3E-09 6.4E-10
An07g03340 hypE Hydrophobin 1.9 2.4 26.9 62.3   1.3 14.4 33.4   3.9E-01 9.6E-08 3.8E-09
An09g05730 fwnA Polyketide synthase involved in pigmentation 2.4 1.2 18.8 36.0   0.5 7.7 14.7   2.6E-03 3.6E-08 1.4E-09
An09g05530 hypG Hydrophobin 0.5 0.4 0.8 1.7   0.8 1.5 3.3   2.4E-02 4.4E-04 2.1E-09
  1. amRNA abundance relative (%) to the gamma-actin (An15g00560) encoding transcript during exponential growth.
  2. bFold changes and FDR q-values for comparisons with transcriptome data from the exponential growth phase.
  3. cExponential growth phase.
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