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Table 2 Partial EC number set common to 50 bacteria of the dataset

From: Exploration of the core metabolism of symbiotic bacteria

Classes

Partial EC

No reactions

 

1.1.1

134

Oxidoreductases

1.2.1

50

 

1.5.1

15

 

2.1.1

46

 

2.1.2

6

 

2.2.1

8

 

2.3.1

47

 

2.4.1

69

 

2.5.1

51

Transferases

2.6.1

51

 

2.7.1

71

 

2.7.2

8

 

2.7.4

19

 

2.7.6

4

 

2.7.7

23

 

2.7.8

15

Hydrolases

3.1.3

39

3.5.1

32

3.5.4

15

 

3.6.1

26

 

4.1.1

49

Lyases

4.1.2

22

 

4.2.1

62

 

5.1.1

10

 

5.1.3

16

Isomerases

5.3.1

21

 

5.4.2

9

 

5.4.99

10

Ligases

6.3.2

19

 

6.3.4

11

Total

30

958

  1. Partial EC number set common to 50 bacteria out of the 58 present in our dataset and the number of reactions in the dataset corresponding to each partial EC number. The 8 bacteria which possess the smallest partial EC number sets were removed to calculate the common set.
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BMC Genomics

ISSN: 1471-2164

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