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Table 3 Protein blastmatrix analysis of nine Brachyspira genomes

From: Comparative genomics of Brachyspira pilosicoli strains: genome rearrangements, reductions and correlation of genetic compliment with phenotypic diversity

 

B. aalborgi

B. alvinipulli

B. hyodysenteriae

B. intermedia

B. intermedia

B. murdochii

B. pilosicoli

B. pilosicoli

B. pilosicoli

513Ta

C1Ta

WA1

PWS/AT

HB60a

56-150T

B2904

95/1000

WesBb

2257 CDS

3228 CDS

2613 CDS

2890 CDS

3392 CDS

2809 CDS

2658 CDS

2301 CDS

2652 CDS

WesB b

21.36%

21.65%

22.73%

24.95%

19.84%

25.95%

68.43%

65.32%

1.73%

95/1000

17.94%

18.56%

20.78%

20.90%

16.77%

22.11%

54.93%

0.74%

 

B2904

20.47%

21.25%

21.74%

23.60%

19.25%

25.35%

2.71%

  

56-150 T

22.37%

31.51%

33.68%

36.40%

29.33%

5.30%

   

HB60 a

20.65%

31.23%

46.77%

57.65%

1.77%

    

PWS/A T

21.05%

32.03%

50.33%

1.56%

     

WA1

17.72%

27.48%

1.11%

      

C1 Ta

23.48%

2.54%

       

513 Ta

1.11%

        
  1. The percentage of the total CDS that were identified in other genomes (green) and the proportion of protein repeats within the genome (red), is shown. A cut-off e-value of 1e-05 was used.
  2. a Incomplete genome currently within a genome sequencing project.
  3. b The incomplete WesB strain genome was within one scaffold.