Table 2 Overlaps (%) of EIs with chromatin marks a
EIs overlap with | Observed | Random within LOCKs | Fold enrichedc | P valueb | Random at WG | Fold enrichedc | P valueb | |
|---|---|---|---|---|---|---|---|---|
HAEC | CTCF | 61.3 | 4.4 | 13.9 | <10-3 | 7.5 | 8.2 | <10-3 |
DHSs | 48.9 | 10.1 | 4.8 | <10-3 | 7.5 | 6.5 | <10-3 | |
H3K4me3 | 23.3 | 6.8 | 3.4 | <10-3 | 5.6 | 4.2 | <10-3 | |
H3K27me3 | 46.0 | 34.1 | 1.4 | <10-3 | 27.8 | 1.7 | <10-3 | |
H3K36me3 | 20.0 | 14.1 | 1.4 | <10-3 | 9.7 | 2.1 | <10-3 | |
H3K9ac | 17.7 | 6.0 | 2.9 | <10-3 | 5.3 | 3.3 | <10-3 | |
H1 | CTCF | 46.9 | 9.0 | 5.2 | <10-3 | 11.8 | 4.0 | <10-3 |
DHSs | 36.0 | 7.1 | 5.1 | <10-3 | 18.1 | 2.0 | <10-3 | |
H3K4me3 | 13.2 | 1.8 | 7.4 | <10-3 | 1.4 | 9.8 | <10-3 | |
H3K27me3 | 21.6 | 10.8 | 2.0 | <10-3 | 9.8 | 2.2 | <10-3 | |
H3K36me3 | 11.0 | 16.1 | 0.7 | 1 | 15.2 | 0.7 | 1 | |
H3K9ac | 28.9 | 11.8 | 2.4 | <10-3 | 11.5 | 2.5 | <10-3 | |
HPF | CTCF | 56.9 | 7.9 | 7.2 | <10-3 | 9.6 | 5.9 | <10-3 |
DHSs | 71.0 | 27.7 | 2.6 | <10-3 | 19.2 | 3.7 | <10-3 | |
H3K4me3 | 30.8 | 8.1 | 3.8 | <10-3 | 13.0 | 2.4 | <10-3 | |
H3K27me3 | 53.1 | 34.2 | 1.6 | <10-3 | 29.0 | 1.8 | <10-3 | |
H3K36me3 | 22.6 | 16.5 | 1.4 | <10-3 | 24.9 | 0.9 | 0.85 | |
H3K9ac | 13.2 | 2.5 | 5.2 | <10-3 | 6.2 | 2.1 | <10-3 |