Table 1 Sequencing and assembly statistics for Illumina sequencing used for the assembly of the P. mexicana transcriptome
Average number of reads (± SD) | 11,698,857 (2,363,343) |
|---|---|
Total number of reads | 70,193,146 |
Average number of base pairs (± SD) | 1,181,584,624 (238,697,721) |
Total number of base pairs | 7,089,507,746 |
Average coverage (± SD) | 23.8 (4.4) |
Total number of assembled contigs | 80,111 |
Total number of unique loci | 53,245 |
Total number of unique loci with predicted ORF | 52,914 |
Mean contig length (basepairs) (± SD) | 932 (1004) |
Maximum contig length | 15,623 |