Genomic resources for a model in adaptation and speciation research: characterization of the Poecilia mexicana transcriptome

Table 2 Results of reciprocal blast searches of the P. mexicana transcriptome to the database of the guppy ( Poecilia reticulata )[54], and Uniprot databases of medaka ( Oryzias latipes ), zebrafish ( Danio rerio ), and stickleback ( Gasterosteus aculeatus )[68]

	P. mexicanato focal species			Focal species toP. mexicana
	UniqueP. mexicanatranscripts	Unique hits in focal species	% coverage in focal species	Unique focal species transcripts	Unique hits inP. mexicana	% coverage inP. mexicana
Guppy	29,671	46,634	65.6	46,953	29,337	55.2
Medaka	19,447	15,337	70.3	14,958	18,277	34.4
Zebrafish	25,013	26,871	51.0	26,870	24,370	45.8
Stickleback	18,037	13,807	73.9	13,554	17,024	28.8

The table lists the number of unique transcripts that map to the reference species’ transcriptome, the number of unique transcripts that received hits in the reference species, and the percent coverage in the references species database.

ISSN: 1471-2164