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Table 2 Percentages of isotigs with BLASTX hits

From: A catalogue of putative unique transcripts from Douglas-fir (Pseudotsuga menziesii) based on 454 transcriptome sequencing of genetically diverse, drought stressed seedlings

    % of isotigs with BLASTX hits vs.
  Avg. lengthof isotigs % of all isotigs nr ara picea
c 393.33 15.08 16.29 9.11 10.59
m 392.77 13.96 14.13 6.22 7.62
s 405.5 15.35 14.77 7.32 8.75
cm 488.89 7.06 24.59 15.8 16.12
cs 493.72 8.19 25.38 17.44 17.19
ms 496.32 5.97 19.14 11.05 11.18
cms 995.32 34.38 58.11 47.24 46.06
  1. Percentages of isotigs (non-singleton PUTs) with a BLASTX hit against the nr, ara, and picea databases within the groups (see Figure3). c = control, m = mild stress, s = severe stress, cm = control and mild stress, cs = control and severe stress, ms = mild and severe stress, cms = control, mild and severe stress.