|
Origin of reads at SNP position
|
Number of SNPs
|
|---|
|
ci/ci
|
15,843
|
|
ci/c
|
7,158
|
|
ci/i
|
2,547
|
|
c/i
|
886
|
|
c/c
|
817
|
|
i/i
|
437
|
- Number of SNPs with a specific composition of reads. ci/ci: variant and reference nucleotide appeared in reads from coastal and interior libraries; ci/c, ci/i: variant or reference nucleotide appeared only in reads of the coastal or interior libraries, the other one appeared in reads of both kind of libraries; c/i: variant or reference nucleotide appeared only in reads of the coastal libraries, the other one only in reads of the interior libraries; c/c, i/i: variant and reference nucleotides appeared only in reads of coastal or interior libraries.
