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Table 1 SNP in protein-coding genes of mtDNA between oguC and nap

From: Complete sequence of heterogenous-composition mitochondrial genome (Brassica napus) and its exogenous source

Gene Nucleic acida Amimo acidb Mutation typec SNP type
nad1 571 C-T 191 L-F N transition
nad2 367 T-C 123 C-R N transition
nad3 265 T-C   S transition
nad4 77 C-T 26 P-L N transition
  1205 C-T 402 P-L N transition
nad7 1079 T-C 360 F-S N transition
cox1* 109 C-T   S transition
  111 T-A   S transversion
  786 T-G   S transversion
cox2-1 379 T-C 127 W-R N transition
ccmB 353 G-A   N transition
ccmC** 126 A-G   S transition
  155 G-A 52 R-H N transition
  338 G-A 113 R-K N transition
  351 G-A   S transition
  476 C-A   S transversion
  533 G-A 178 G-A N transition
  551 G-A 184 G-D N transition
ccmFC 283 G-A 95 E-K N transition
ccmFN1 361 T-A 121 F-I N transversion
  1000 C-T 334 L-F N transition
ccmFN2 380 C-T 127 L-S N trnasition
atp1 987 T-C   S transition
atp4 176 C-T 59 A-V N transition
atp8* 370 A-C 124 L-I N transversion
  448 T-C 150 A-V N transition
atp9 64 A-G 22 I-V N transition
rps3 1254 A-C   S transversion
  1320 A-C   S transversion
rps4 189 T-G   S transversion
  776 C-T 259 S-F N transition
rps12* 12 T-G 4 F-L N transversion
  336 A-C 112 R-S N transversion
  345 A-C   S transversion
rpl2 464 G-A 155 G-D N transition
  840 C-T   S transition
  1004 C-T 335 S-L N transition
rpl5 515 T-C 172 L-P N transition
rpl16 506 C-T 169 P-L N transition
  1. a Location of base mutation, bLocation and switch of amino acid mutation, c S,Synonymous; N, Non-synonymous.
  2. * Nucleotide sequence of genes identical to Raphanus sativus ** Two SNPs when compared to Raphanus sativus.