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Table 2 Correlations

From: A model of binding on DNA microarrays: understanding the combined effect of probe synthesis failure, cross-hybridization, DNA fragmentation and other experimental details of affymetrix arrays

Design Number of chips Number of probe spots per chip Number of parameters that were fit to each chip Number of PCR products Mean correlation between expected and observed probe intensities
cwrs-07 40 230640 21 9 0.765 ± 0.038
cwrs-39 40 230240 20 8 0.605 ± 0.020
cwrs-51 40 226592 23 11 0.730 ± 0.021
cwrs-53 40 230432 21 9 0.714 ± 0.016
cwrs-63 40 229280 21 9 0.666 ± 0.028
cwrs-67 40 231776 18 6 0.629 ± 0.029
fmr1 62 80408 16 4 0.762 ± 0.081
  1. Table2: Summary for each chip design.