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Table 4 Large sequences present in the three sheep strain genomes but absent in MAP K-10.

From: Genome sequencing of ovine isolates of Mycobacterium avium subspecies paratuberculosis offers insights into host association

LSP

Location

Gene Content

Name

Synonym

Start

Stop

Size

Contig

ORFs

LSPs1

LSPA4-II (RD20)

34,308

43,318

9.01

00036c

MAPs_15940-16060

LSPs2

LSPA18 (RD10)

116,723

123,369

6.64

00127c

MAPs_46190-46270

LSPs3

 

15,581

19,356

3.78

00035c

MAPs_14620-14660

LSPs4

 

124,533

128,162

3.63

00127c

MAPs_46290-46320

LSPs5

 

87,461

90,928

3.47

00126c

MAPs_17580-17610

LSPs6

 

4,736

7,731

2.99

00161

MAPs_40470-40500

LSPs7

 

2

2,889

2.88

00133c

MAPs_17640-17670

LSPs8

 

47,323

49,712

2.39

00199c

MAPs_02730-02760

LSPs9

 

70,659

72,500

1.84

00033

MAPs_23120-23150

LSPs10

 

5,879

7,457

1.58

00100

MAPs_42460-42490

  1. LSP Large sequence polymorphism as identified before [29]
  2. Size is in kilobases
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BMC Genomics

ISSN: 1471-2164

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