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Table 1 Runtimes

From: Haplotype and minimum-chimerism consensus determination using short sequence data

Coverage # SNPs # Reads Runtime
5X 1482 120 15 secs
10X 1970 240 61 secs
15X 2186 360 155 secs
20X 2280 480 430 secs
  1. Runtimes, simulating sequencing of the low diversity dataset with high error rate and "Simple" SNP caller (so that each read is considered as a unique haplotype).