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Table 1 The AUC of CTF, Chromia and PWM on the dataset of 13 TFs

From: CTF: a CRF-based transcription factor binding sites finding system

 

CTF

Chromia

PWM

c-Myc

0.98

0.94

0.84

CTCF

0.76

0.69

0.76

E2f1

0.96

0.94

0.75

Esrrb

0.89

0.84

0.77

Klf4

0.96

0.92

0.83

Nanog

0.83

0.82

0.62

n-Myc

0.97

0.94

0.86

Oct4

0.92

0.88

0.61

Smad1

0.92

0.89

0.66

Sox2

0.90

0.87

0.70

STAT3

0.91

0.86

0.72

Tcfcp2l1

0.88

0.83

0.79

Zfx

0.97

0.96

0.82

Average

0.91

0.88

0.75