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Figure 3 | BMC Genomics

Figure 3

From: A hybrid next generation transcript sequencing-based approach to identify allelic and homeolog-specific single nucleotide polymorphisms in allotetraploid white clover

Figure 3

(A,B). Annotation results. A: Numbers and proportions of sequences successfully passing the subsequent steps of the annotation procedure of BLAST2GO as described in the Methods (contigs on the left and singlets on the right). No BLAST Hits: Sequences with no significant blastx hit to non-redundant protein database described in the methods. No Mapping: Sequences with blastx hits >1e-6, but for which no GO terms could be associated to the BLAST results. No Annotation: Sequences with blastx hits >1e-6 and associated GO terms lying below the GO annotation rule thresholds described in the Methods section. Annotation: Sequences with BLAST hits >1e-6 which were successfully assigned GO terms. B: Distribution of the main GO categories in annotated contigs (on the left) and singlets (on the right). Top level GO categories (Biological process, Molecular function and Cellular component) are shadowed. Bars in lighter colours represent sub-categories within the top level categories. The X-axis scale is logarithmic.

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