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Table 1 Numbers of transcripts that are either up- or down-regulated during the mycoparasitic response of T. reesei , T. atroviride and T. virens

From: Comparative transcriptomics reveals different strategies of Trichodermamycoparasitism

Species Section Genes Transcripts Proteins
With identified function Unknown Orphan
Total Up/down (%*) Total Up/down (%) Total Up/down (%) Total Up/down (%)
T. reesei Longibrachiatum 9 143 424 36.6/63.4 264 44.7/55.3 137 23.4/76.6 23 21.7/78.3
T. atroviride Trichoderma 11 865 651 53.1/46.9 432 52.1/47.9 173 58.4/41.6 46 43.5/56.5
T. virens Pachybasium 12 428 303 15.5/84.5 211 19.4/80.6 71 8.5/91.5 21 0/100
  1. *the percentages of up- and down regulated genes are calculated based on the total number of transcripts found within each group of genes; bold fond highlights larger values.