|  | PG with γ=99.9% vs FREEC |  | PG with γ=99.9% vs cn.MOPS | ||||
---|---|---|---|---|---|---|---|---|
CNV | Sample |
|
|
| Â |
|
|
|
Deletions | HB3 | 175 (55.2) | 130 (41.0) | 12 (3.8) | Â | 195 (63.5) | 110 (35.8) | 2 (0.7) |
 | DD2 | 175 (63.9) | 90 (32.8) | 9 (3.3) |  | 152 (57.4) | 113 (42.6) | 0 (0.0) |
 | 7G8 | 81 (29.1) | 124 (44.6) | 73 (26.3) |  | 120 (21.4) | 85 (15.1) | 357 (63.5) |
 | GB4 | 72 (27.4) | 181 (68.8) | 10 (3.8) |  | 150 (50.0) | 103 (34.3) | 47 (15.7) |
 | OX005 | 153 (51.0) | 121 (40.3) | 26 (8.7) |  | 205 (69.3) | 69 (23.3) | 22 (7.4) |
 | OX006 | 93 (55.0) | 74 (43.8) | 2 (1.2) |  | 62 (37.1) | 105 (62.9) | 0 (0.0) |
Amplifications | HB3 | 19 (29.7) | 41 (64.1) | 4 (6.3) | Â | 23 (12.2) | 37 (19.7) | 128 (68.1) |
 | DD2 | 586 (84.3) | 48 (6.9) | 61 (8.8) |  | 608 (85.2) | 26 (3.6) | 80 (11.2) |
 | 7G8 | 187 (37.6) | 28 (5.6) | 283 (56.8) |  | 212 (17.8) | 3 (0.3) | 973 (81.9) |
 | GB4 | 6 (10.5) | 41 (71.9) | 10 (17.5) |  | 38 (11.8) | 9 (2.8) | 274 (85.4) |
 | OX005 | 62 (4.2) | 130 (8.8) | 1291 (87.1) |  | 168 (5.7) | 24 (0.8) | 2473 (93.5) |
 | OX006 | 27 (22.9) | 63 (53.4) | 28 (23.7) |  | 64 (20.9) | 26 (8.5) | 216 (70.6) |