Genetic architecture of gene expression in the chicken

BMC Genomics

Table 1 Modules identified using WGCNA and a most enriched GO category in each module

Module	Module size (genes)	% of Genes with functional annotation	Top enriched GO category	Fold GO enrichment	GO enrichment p-value
1. Green	473	93.23	intracellular transport	3.90	2.75E-07
2. Brown	387	82.95	cell cycle	10.08	1.56E-25
3. Yellow	256	62.89	extracellular matrix part	18.83	3.96E-17
4. Red	227	83.26	cytoskeleton	3.88	1.75E-04
5. Turquoise	103	38.83	organ growth	92.03	4.01E-04
6. Greenyellow	99	77.78	response to stress	7.58	8.30E-04
7. Blue	81	32.10	low annotation
8. Magenta	67	28.36	low annotation
9. Purple	58	86.21	actin cytoskeleton	13.87	1.74E-02
10. Tan	58	87.93	antigen processing	69.02	1.46E-13
11. Pink	57	80.70	immune response	19.75	4.01E-07
12. Salmon	39	94.87	alpha-catenin binding	314.76	5.89E-03
13. Black	33	69.70	no GO enrichment
14. Lightcyan	25	84.00	lipid biosynthetic process	38.52	1.97E-10
15. Cyan	24	91.67	muscle protein	76.39	1.69E-20

Additional file 1: Table S1 contains full tables with all of the GO categories and clusters of GO categories enriched.

ISSN: 1471-2164