Skip to main content

Table 2 Putative targets of miR-30a after whole genome expression (WGE) analysis of miR-30a overexpression

From: MicroRNA miR-30 family regulates non-attachment growth of breast cancer cells

Gene name Pre-miR-30a miR-159 k.d. Fold-change Score
ACP2 103.98 160.67 0.65 −6.23
ARID5B 97.55 145.53 0.67 −2.96
ARVCF 44.57 61.42 0.73 −2.66
ATG12 134.92 192.78 0.70 −3.36
AVEN 89.8 166.93 0.54 −9.51
BNIP3L 64.7 95.14 0.68 −4.93
C14orf129 165.21 278.97 0.59 −1.92
C1orf19 291.73 475.23 0.61 −11.7
C2orf30 175.86 317.2 0.55 −10.18
C3orf57 855.03 1500.97 0.57 −1.39
CHMP2B 294.63 447.1 0.66 −7.54
DCUN1D3 85.59 141.19 0.61 1.38
DPY19L1 194.24 277.5 0.70 −4.87
DPYSL2 315.4 502.3 0.63 −5.31
EDG3 100.43 149.23 0.67 −1.99
ELMOD2 81.24 123.28 0.66 1.74
FAM18B 121.66 169.09 0.72 −4.05
FOXD1 104.98 150.49 0.70 −2.49
GNAI2 229.93 496.33 0.46 −11.2
GNG10 91.32 139 0.66 −7.76
GNPDA1 489.02 831.37 0.59 −0.6
KDELC2 116.08 204.6 0.57 −3.39
KIAA0241 99.59 151.45 0.66 −2.69
NECAP1 157.52 253.56 0.62 −6.58
PDSS1 257.51 381.04 0.68 5.63
PGM1 196.55 309.58 0.63 −6.5
PIK3R2 762.04 1060.6 0.72 −5.76
PPP1R2 279.79 504.81 0.55 −9.54
REEP3 56.69 79.57 0.71 −5.93
REXO4 174.68 257.94 0.68 −6.87
RPA2 385.11 641.74 0.60 −1.52
SEC23A 54.91 75.17 0.73 −4.48
TFDP1 709.63 1059.53 0.67 −7.84
TM4SF1 436.61 828.33 0.53 −6.84
TRIB3 277.11 422.9 0.66 −2.06
VKORC1L1 335.84 525.07 0.64 −3.44
  1. Significantly downregulated genes after Pre-miR-30a transfection. Only potential targets with 3′UTR seed sequences of miR-30a are included. “Scores” are based on the PITA algorithm, as described in Materials and Methods. Targets common to miR-30 family WGE analysis are underlined.