Table 3 Genes selected, based on RPKM, from some biological processes induced in soybean roots inoculated with strain CPAC 15 of B. japonicum
Biological process | Genes | Description | RPKMa | Noreads |
|---|---|---|---|---|
Signaling | Glyma16g29220.1 | LRR (Leucine rich repeat) | 210,781 | 158,479 |
Glyma03g32700.2 | LRR (Leucine rich repeat) | 1,943.56 | 1,149 | |
Glyma13g03910.1 | Calmodulin | 2,424.67 | 1,940 | |
Glyma05g13900.1 | Calmodulin | 1,743 | 2,510 | |
Glyma20g10820.1 | Calmodulin | 1,470.5 | 2,522 | |
Response to stimulus | Glyma20g23080.1 | Calreticulin | 1,823.09 | 5,531 |
Glyma15g02220.1 | PDR (Pleiotropic drug resistance) | 1,735.93 | 384 | |
Glyma08g29090.1 | Glycoside hydrolase 19 | 1,177.12 | 1,319 | |
Glyma18g51980.1 | Glycoside hydrolase 19 | 1,027.26 | 1,122 | |
Transport | Glyma20g32000.1 | Aquaporin | 1,377.3 | 3,533 |
Glyma10g35520.2 | Aquaporin | 1,613.69 | 3,245 | |
Glyma14g06680.5 | Aquaporin | 2,989.98 | 9,195 | |
Glyma12g29510.2 | Aquaporin | 1,744.05 | 4,347 | |
Glyma12g08040.1 | Aquaporin | 5,022.48 | 5,497 | |
Glyma05g32620.1 | ABC transport | 1,834.5 | 531 | |
Glyma08g00280.1 | ABC transport | 1,053.41 | 949 | |
Glyma08g28190.1 | Amino acid transporter | 1,734.53 | 4,473 | |
Glyma18g51220.1 | Amino acid transporter | 2,511.83 | 5,376 | |
Glyma20g33000.1 | Amino acid transporter | 1,273.41 | 1,325 | |
Glyma10g32750.1 | Oligopeptide transporter | 2,462.59 | 5,684 | |
Glyma19g45260.1 | Potassium transporter | 6,052.79 | 4,615 | |
Potassium transporter | 1,865.16 | 1,468 | ||
Potassium transporter | 1,636.9 | 2,268 | ||
Potassium transporter | 2,088.8 | 3,890 | ||
| Â | Glyma03g31310.1 | Sulfate transporter | 1,421.28 | 1,314 |