Table 1 General features of the sequenced chlorovirus genomes
From: Towards defining the chloroviruses: a genomic journey through a genus of large DNA viruses
Virus | Host | # Contigs | Genome size (Kb) | Sequence coverage | % GC | # protein genes | # tRNA genes | # protein families | Genbank accession number |
|---|---|---|---|---|---|---|---|---|---|
AN69C | NC64A | 8 | 332 | 29x | 40 | 362 | 10 | 278 | JX997153 |
CviKI | NC64A | 8 | 308 | 55x | 40 | 336 | 14 | 271 | JX997162 |
CvsA1 | NC64A | 9 | 310 | 36x | 40 | 342 | 14 | 272 | JX997165 |
IL-3A | NC64A | 3 | 323 | 50x | 40 | 349 | 12 | 273 | JX997169 |
IL-5-2s1 | NC64A | 9 | 344 | 65x | 41 | 379 | 8 | 281 | JX997170 |
KS1B | NC64A | 7 | 287 | 46x | 40 | 319 | 13 | 257 | JX997171 |
MA-1D | NC64A | 9 | 339 | 45x | 41 | 371 | 11 | 288 | JX997172 |
MA-1E | NC64A | 39 | 336 | 27x | 40 | 376 | 14 | 269 | JX997173 |
NE-JV-4 | NC64A | 8 | 328 | 41x | 40 | 352 | 11 | 276 | JX997179 |
NY-2B | NC64A | 5 | 344 | 59x | 41 | 371 | 8 | 281 | JX997182 |
NYs-1 | NC64A | 9 | 348 | 64x | 41 | 381 | 7 | 286 | JX997183 |
AP110A | Pbi | 6 | 327 | 27x | 44 | 348 | 9 | 269 | JX997154 |
Can18-4 | Pbi | 11 | 329 | 52x | 45 | 357 | 10 | 271 | JX997157 |
CVA-1 | Pbi | 8 | 326 | 36x | 45 | 346 | 9 | 270 | JX997159 |
CVB-1 | Pbi | 8 | 319 | 90x | 44 | 346 | 10 | 272 | JX997160 |
CVG-1 | Pbi | 7 | 318 | 48x | 45 | 333 | 9 | 262 | JX997161 |
CVM-1 | Pbi | 5 | 327 | 48x | 44 | 341 | 9 | 268 | JX997163 |
CVR-1 | Pbi | 11 | 329 | 39x | 45 | 351 | 9 | 268 | JX997164 |
CZ-2 | Pbi | 11 | 305 | 39x | 45 | 340 | 10 | 262 | JX997166 |
Fr5L | Pbi | 22 | 302 | 58x | 45 | 345 | 11 | 257 | JX997167 |
NE-JV-1 | Pbi | 8 | 326 | 45x | 47 | 337 | 3 | 265 | JX997176 |
NW665.2 | Pbi | 6 | 325 | 62x | 44 | 350 | 8 | 263 | JX997181 |
OR0704.2.2 | Pbi | 8 | 313 | 53x | 45 | 344 | 7 | 261 | JX997184 |
Br0604L | SAG | 2 | 295 | 65x | 49 | 346 | 9 | 272 | JX997155 |
Can0610SP | SAG | 1 | 307 | 61x | 49 | 341 | 13 | 267 | JX997156 |
Canal-1 | SAG | 4 | 293 | 50x | 51 | 336 | 10 | 277 | JX997158 |
GM0701.1 | SAG | 4 | 315 | 71x | 48 | 362 | 10 | 272 | JX997168 |
MN0810.1 | SAG | 6 | 327 | 57x | 52 | 343 | 9 | 268 | JX997174 |
MO0605SPH | SAG | 3 | 289 | 107x | 49 | 323 | 11 | 271 | JX997175 |
NE-JV-2 | SAG | 4 | 319 | 40x | 48 | 346 | 13 | 271 | JX997177 |
NE-JV-3 | SAG | 3 | 298 | 63x | 49 | 334 | 12 | 268 | JX997178 |
NTS-1 | SAG | 4 | 323 | 35x | 48 | 364 | 7 | 271 | JX997180 |
OR0704.3 | SAG | 5 | 311 | 49x | 49 | 342 | 13 | 272 | JX997185 |
TN603.4.2 | SAG | 3 | 321 | 28x | 49 | 351 | 9 | 276 | JX997186 |
WI0606 | SAG | 7 | 289 | 58x | 50 | 329 | 11 | 271 | JX997187 |