From: Ancient orphan crop joins modern era: gene-based SNP discovery and mapping in lentil
Line | Type | Origin1 | Adaptation2 | Total 454 reads | Reference assembly | Contigs with SNPs | Total SNPs | Average read depth |
---|---|---|---|---|---|---|---|---|
CDC Redberry | Small red | Canada | NT | 1,034,231 | 27,921 | N/A | N/A | N/A |
CDC Robin | Small red | Canada | NT | 394,707 | N/A | 2177 | 4727 | 12 |
964A-46 | Large green | Canada | NT | 370,621 | N/A | 1967 | 4138 | 10 |
Eston | Small green | Turkey | NT | 410,494 | N/A | 1240 | 2690 | 17 |
PI 320937 | Black | Germany | NT | 419,342 | N/A | 2003 | 4276 | 11 |
LC8602303T | Small red | USA | MED | 366,006 | N/A | 2762 | 6371 | 13 |
ILL 5588 | Small red | Jordan | MED | 217,539 | N/A | 1684 | 3740 | 8 |
CDC Milestone | Small green | Canada | NT | 592,086 | N/A | 1569 | 3390 | 31 |
ILL 8006 | Small red | Bangladesh | STS | 523,958 | N/A | 4304 | 9797 | 15 |
L01-827A | L. ervoides | 3 | MED | 218,657 | N/A | 3264 | 10,793 | 10 |
IG 72815 | L. ervoides | ICARDA | MED | 370,513 | N/A | 5847 | 19,946 | 10 |
Total | Â | Â | Â | 4,918,154 | Â | 11,0504 | 44,8794 | Â |