5'-Serial Analysis of Gene Expression studies reveal a transcriptomic switch during fruiting body development in Coprinopsis cinerea

Table 6 Correlation of expression of 18 randomly-selected genes among 5 ^′ -SAGE, microarray and real-time RT-PCR

	Description	5^′-SAGE^a	Microarray^a	Real-time RT-PCR^a
CC1G_04976	Thiazole biosynthetic enzyme	6.48	3.34	3.80
CC1G_03790	Glutamate decarboxylase	5.55	1.64	3.55
CC1G_00577	CMGC/MAPK protein kinase	4.41	1.41	2.76
CC1G_03377	Protoporphyrinogen oxidase	3.41	−0.17	1.66
CC1G_00689	Thioredoxin	3.16	0.72	2.91
CC1G_07379	Hypothetical protein	1.57	0.19	1.59
CC1G_06934	Hypothetical protein	1.06	−0.85	1.34
CC1G_02958	Actin cytoskeleton protein VIP1	0.82	0.79	0.92
CC1G_10110	Ubiquitin-carboxy protein fusion	−0.05	−0.35	−0.32
CC1G_03278	ATP synthase subunit 5	−0.07	−0.21	−0.41
CC1G_07540	60S ribosomal protein L34-b	−0.16	−0.64	−0.45
CC1G_07277	40S ribosomal protein S14	−0.95	−0.41	−0.78
CC1G_01940	ATP-synthase delta-subunit	−1.34	−0.73	−1.23
CC1G_03707	Prohibitin	−1.43	−0.37	−1.44
CC1G_09336	Basic leucine zipper & W2 domain-containing protein 2	−1.97	−1.17	−1.98
CC1G_06761	Glycine dehydrogenase	−4.42	0.45	−0.82
CC1G_14100	Hypothetical protein	−5.82	−1.53	−3.42
CC1G_01315	Endochitinase	−6.63	−1.45	−4.66
	Correlation of 5^′-SAGE and real-time PCR: R=0.936
	Correlation of 5^′-SAGE and microarray: R=0.792

ISSN: 1471-2164