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Table 3 Functional classification, putative function (BLASTp (a) or BLASTn (b)) for the isolated genes

From: Effects of salinity on the transcriptome of growing maize leaf cells point at cell-age specificity in the involvement of the antioxidative response in cell growth restriction

GenBank Accession No.

GI

Protein ID

Annotation onZea MaysGene/Homologa

Score

E Value

Region

FI

Salt/Control

Antioxidant Defense

      

EU968806

GI:195642911

ACG40924.1

Isovaleryl-CoA dehydrogenase mRNA

333

1e-90

15–30

2.96

BT018773

GI:54653554

NP_001150213.1

Acyl-[acyl-carrier-protein] desaturasea

401

3e-111

15–30

2.60

NM_001157202

GI:226492618

NP_001150674.1

Transaldolase 2

422

1e-116

15–30

2.81

EU958813

GI:195618201

ACG30931.1

3-isopropylmalate dehydratase small subunit 2

387

1e-106

15–30

3.17

NM_001155533

GI:226508813

NP_001149005.1

Aspartate aminotransferase

654

0.0

15–30

2.02

EU960286

GI:195621147

ACG32404.1

Acyl-CoA-binding protein

710

0.0

15–30

2.86

NM_001157741

GI:226499079

NP_001151213.1

Dihydroflavonol-4-reductase

545

2e-154

15–30

2.54

NM_001111889

GI:162459146

NP_001105359.1

Carbonic anhydrase

689

0.0

30–50

2.20

EU956253

GI:195613081

ACG28371.1

Phosphoserine phosphatase

765

0.0

30–50

0.46

Structural

       

NM_001156318

GI:226500875

NP_001149790.1

Peptidyl-prolyl isomerase/cyclophylin

366

1-100

15–30

2.06

X68678.1

GI:829147

CAA48638.1

Cyclophylin

612

0.0

15–30

2.10

NM_001154900

GI:226497771

NP_001148372.1

Zn-finger, RanBP-type, cyclophilin-related protein

1090

0.0

15–30

2.13

EU977128.1

GI:195659556

ACG49246.1

UDP-glucuronic acid decarboxylase

1267

0.0

15–30

2.11

EU975955

GI:195657210

ACG48073.1

DNA-3-methyladenine glycosylase I

172

3e-42

15–30

3.14

NM_001174192

GI:293331322

NP_001167663.1

Tubulin alpha-3 chain

824

0.0

15–30

2.82

EU957585

GI:195615745

ACG29703

Retrotransposon protein

1186

0.0

15–30

2.09

NM_001153810

GI:226532905

NP_001147282.1

Ca2+-binding protein (EF-Hand superfamily)

669

0.0

15–30

2.04

NM_001155943

GI:226506681

NP_001149415.1

CTD-phosphatase-like protein

883

0.0

15–30

2.54

BT017876

GI:54652657

 

TIC21 iron ion transmembrane transporter

189

2e-47

15–30

2.85

NM_001111466

GI:162458261

NP_001104936.1

Dihydrolipoamide S-acetyltransferase

651

0.0

15–30

2.47

EU952983

GI:195606541

ACG25101.1

Threonine endopeptidase

278

4e-74

15–30

2.11

EU971467

GI:195648233

ACG43585.1

Calmodulin

577

8e-164

15–30

2.30

U29159

GI:902583

AAC49013.1

MubG1 ubiquitin gene

1227

0.0

15–30

3.39

EU963111

GI:195626797

ACG35229.1

Esterase precursor

852

0.0

15–30

2.29

NM_001174804

GI:293334320

NP_001168275.1

Translation initiation factor 4 

357

7e-98

15–30

3.44

EU959748

GI:195620071

ACG31866.1

Elongation factor 1A

1426

0.0

15–30

2.82

EU968344.1

GI:195641987

ACG40462.1

60S ribosomal protein L3 

370

9e-102

15–30

2.85

NM_001156254

GI:226502948

NP_001149726.1

60S ribosomal protein L5-1

800

0.0

15–30

2.30

EU970864

GI:195647027

ACG42982.1

40S ribosomal protein S19

682

0.0

15–30

2.96

EU958804

GI:195618183

ACG30922.1

40S ribosomal protein S4

436

1e-121

15–30

2.01

EU967930

GI:195641159

ACG40048.1

40S ribosomal protein S27a

710

0.0

15–30

2.07

EU952013.1

GI:195604601

ACG24131.1

30S ribosomal protein 3

401

3e-111

15–30

2.33

NM_001152240

GI:226505273

NP_001145712.1

SORBIDRAFTaSb=HSP70 cognate

933

0.0

15–30

2.08

BT085557

GI:238009749

ACR35910.1

Heat shock protein 70 cognate

837

0.0

15–30

2.19

NM_001154333

GI:226498819

NP_001147805.1

Heat shock 70 kDa protein 4

972

0.0

15–30

2.02

NM_001176042

GI:293336702

NP_001169513.1

TIDP2694, unknown function

451

4e-126

15–30

2.91

BT083594

GI:238005823

ACR33947.1

Transmembrane 9 superfamily protein 1 precursor

429

2e-119

15–30

2.01

EU948567

GI:195600921

 

Unknown

355

4E-97

30–50

10.78

NM_001157043

GI:226498795

NP_001150515.1

Dirigent-like protein pDIR9

344

7e-94

30–50

2.83

NM_001155737

GI:226504345

NP_001149209.1

1-aminocyclopropane-1-carboxylate oxidase ACC oxidase

442

3e-123

30–50

0.48

EU946392

GI:195598746

NP_001142128.1

Hydroxyproline-rich glycoprotein family proteina

662

0.0

30–50

2.01

BT064284

GI:223949794

ACN28981.1

Aspartic proteinase

429

2e-119

30–50

0.48

BT084696

GI:238008027

ACR35049.1

Elongation factor EF-Tsa

305

2e-82

30–50

0.47

BT061533

GI:223944292

ACN26230.1

Abhydrolase6, Hydrolase

446

2e-124

30–50

2.01

NM_001111648

GI:162461640

NP_001105118.1

Proline-rich protein; CL1298_1_ov

459

2e-128

30–50

0.25

NM_001147683

GI:226505411

NP_001141155.1

Oligopeptidasea, Rc

813

0.0

30–50

0.28

EU967200

GI:195639699

ACG39318.1

50S ribosomal protein L

263

1e-69

30–50

0.46

BT070196

GI:224036034

CN37093.1

18S ribosomal RNA gene

838

0.0

30–50

0.48

NM_001153810

GI:226532905

NP_001147282.1

Ca2+-binding protein (EF-Hand superfamily)

411

6e-114

30–50

0.48

EU957222

GI:195615019

ACG29340.1

Transposon protein CACTA

411

7e-114

30–50

0.24

NM_001138563

GI:212722439

NP_001132035

IAA15 - auxin-responsive Aux/IAA family member 

571

4e-162

30–50

0.23

NM_001148300

GI:239050004

NP_001141772

PGR5-LIKE Aa

412

2e-114

30–50

0.17

Transcription Factors

     

BT063988

GI:223949202

ACN28685.1

drought-responsive factor-like transcription factora

636

0.0

15–30

2.41

NM_001155696

GI:226532553

NP_001149168.1

RING finger, CHYzinc finger domain-containing

747

0.0

15–30

2.43

Photosynthesis

       

EU967333

GI:195639965

ACG39451.1

Chlorophyll a-b binding protein CP24

241

5e-63

15–30

2.31

EU959735

GI:195620045

ACG31853.1

CP protein

239

2e-62

15–30

2.81

AY109815

GI:21213680

 

Magnesium chelatase subunit chlDa

619

1e-176

15–30

2.80

EU965631

GI:195636561

ACG37749

Ribulose bisphosphate carboxylase small chain

455

3e-127

15–30

2.19

BT069905

GI:224035452

ACN36802.1

AAA-metalloprotease FtsHa

920

0.0

30–50

0.46

EU965428

GI:195636155

ACG37546.1

Triose phosphate/phosphate translocator

1338

0.0

30–50

0.46

NM_001111878

GI:162463911

NP_001105348.1

Oxygen-evolving enhancer protein 3-1

520

1e-146

30–50

0.48

Energy

       

EU953063

GI:195606701

ACG25181.1

Glyceraldehyde-3-phosphate dehydrogenase(GAPDH)

883

0.0

15–30

2.01

BT039975

GI:194701791

ACF84980.1

Cytosolic GAPDH

660

0.0

15–30

2.54

NM_001155853

GI:226507591

NP_001149325.1

ATP-citrate synthase

723

0.0

15–30

2.05

NM_001111964

GI:193211363

NP_001105434.1

Adenine nucleotide translocator (ANT2)

505

3e-142

15–30

2.60

EU96468

GI:195634658

ACG36798.1

Fructose-bisphosphate aldolase

161

2e-39

15–30

2.15

EU963078

GI:195626731

ACG35196.1

Vacuolar ATP synthase subunit G

167

6e-41

15–30

2.00

BT086232

GI:238011099

ACR36585.1

Vacuolar proton-inorganic pyrophosphatase

1042

0.0

15–30

2.01

NM_001155046

GI:226508897

NP_001148518.1

Malate dehydrogenase, glyoxysomal

1158

0.0

15–30

2.06

EU952363

GI:195605301

NP_001169698.1

2-oxoglutarate dehydrogenase E1 

326

3e-88

15–30

2.23

EU955065

GI:195610705

ACG27183.1

Inorganic pyrophosphatase

1099

0.0

30–50

2.96

NM_001111961

GI:193211484

NP_001105431.1

Adenine nucleotide translocator (ANT1)

278

4e-78

30–50

0.48

  1. GI-NCBI accession number, protein ID- protein NCBI accession number, region-the leaf zone from which the gene was isolated, FI-fold induction. Letters in uppercase above the gene name mark homolog to other species: a-Arabidopsis thaliana, Rc-Ricinus communis.