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Table 2 PST genome assembly statistics

From: Genome analyses of the wheat yellow (stripe) rust pathogen Puccinia striiformis f. sp. triticireveal polymorphic and haustorial expressed secreted proteins as candidate effectors

Isolate

Median coverage

No. of contigs

Total length (bp)

N50 (bp)

Max length (bp)

Median length (bp)

Average length (bp)

PST-21

66x

43,106

73 Mb

3,960

37,006

713

1,695

PST-43

26x

49,784

71 Mb

3,264

35,154

596

1,421

PST-130a

59x

29,178

65 Mb

5,137

49,498

901

2,220

PST-87/7

15x

55,502

53 Mb

1,302

46,297

652

962

PST-08/21

21x

50,898

56 Mb

1,600

35,677

708

1,106

  1. a Previously sequenced isolate [14].
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BMC Genomics

ISSN: 1471-2164

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