Table 5 Tribe members selected for expression profiling during PST infection of wheat
Tribe no. | Tribe ranking | No. of proteins | Average protein length (amino acids) | Species distribution (No. of proteins) | No. of proteins in top 100 expressed during infection | No. of proteins in top 100 expressed in haustoria | Members assessed for peak in expression | General effector features (No. of proteins) |
|---|---|---|---|---|---|---|---|---|
63 | 2 | 13 | 180 | PST (2), PGT (5), Mel (6) | 2 | 2 | 1 dpi (1) | Similarity to M. lini hesp-C49 (10); Internal repeats (2); Members encoded by genes with 1 FIR ≥10Kb (2); Without PFAM annotation (11) |
467 | 3 | 3 | 109 | PST | 0 | 3 | 14 dpi (1) | SCRs (3); Without PFAM annotation (3) |
238 | 10 | 5 | 112 | PST | 0 | 5 | 14 dpi (2) | Internal repeats (2) |
413 | 12 | 3 | 95 | PST (2), PGT (1) | 1 | 2 | 14 dpi (2) | Y/F/WxC (2); SCRs (3); Without PFAM annotation (1) |
276 | 13 | 4 | 288.5 | PST (2), PGT (1), Mel (1) | 0 | 2 | 1 dpi (1) | Similarity to M. lini hesp-735 (3) and hesp-379 (1); Internal repeats (1); Without PFAM annotation (1) |
351 | 22 | 4 | 276.5 | PST (3), PGT (1) | 0 | 3 | 14 dpi (1) | Internal repeats (2); Without PFAM annotation (2) |
317 | 25 | 4 | 209.5 | PST (3), PGT (1) | 0 | 3 | 1 dpi (1) | - |
308 | 28 | 4 | 145 | PST | 0 | 3 | 1 dpi (1) | SCRs (3); Without PFAM annotation (3) |
596 | 31 | 2 | 139 | PST | 0 | 2 | 1 dpi (1) | Without PFAM annotation (2) |
79 | 34 | 12 | 299.5 | PST (8), PGT (1), Mel (3) | 0 | 4 | Stable (1) | Y/F/WxC (2), LIAR (1); Members encoded by genes with 1 FIR ≥10Kb (1); Without PFAM annotation (2) |
928 | 43 | 1 | 163 | PST | 1 | 1 | 6 dpi (1) | Y/F/WxC (1); Without PFAM annotation (1) |
1004 | 43 | 1 | 132 | PST | 1 | 1 | 6 dpi (1) | Without PFAM annotation (1) |
593 | 60 | 2 | 160 | PST | 0 | 1 | 1 dpi (1) | Without PFAM annotation (1) |
544 | 75 | 2 | 216 | PST (1), PGT (1) | 0 | 1 | 6 dpi (1) | SCRs (1); Internal repeats (1); Without PFAM annotation (2) |
1232 | 78 | 1 | 163 | PST | 0 | 1 | 14 dpi (1) | Without PFAM annotation (1) |
1118 | 96 | 1 | 201 | PST | 0 | 1 | 6 dpi (1) | LIAR (1) |
426 | 133 | 3 | 142 | PST | 1 | 1 | 14 dpi (1) | Without PFAM annotation (1) |
6 | 154 | 49 | 224 | PST (27), PGT (21), Mel (1) | 0 | 4 | 1 dpi (2), 14 dpi (1) | Y/F/WxC (1), LIAR (2), RXLR (1); Without PFAM annotation (31) |