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Table 1 Genes up- or down-regulated over time

From: Exploring the larval transcriptome of the common sole (Solea soleaL.)

MUSCLE DEVELOPMENT
Probe Name Ensembl Acc. Number Gene name
N_isotig14746 ENSDARG00000032976 Cardiac myosin light chain-1
P_isotig00564 ENSDARG00000023963 Tropomyosin
N_isotig13004 ENSDARG00000020610 Troponin T
N_isotig07042 ENSDARG00000024141 Caveolin 3
N_isotig07602 ENSDARG00000009021 Cholinergic receptor, nicotinic, alpha 1 (CHNRA)
N_isotig21306 ENSDARG00000071433 Slow myosin heavy chain 2
N_isotig01223 ENSDARG00000045242 Slow myosin heavy chain 3
N_isotig04075 ENSDARG00000028213 Titin a
N_isotig11618 ENSDARG00000000563 Titin b
N_isotig08672 ENSDARG00000019342 Cholinergic receptor, nicotinic, delta polypeptide
N_isotig19778 ENSDARG00000031756 Myocyte enhancer factor 2a
N_isotig05817 ENSDARG00000054942 Lectin, galactoside-binding, soluble, 1 (galectin 1)-like 1
P_isotig17511 ENSDARG00000026473 Sine oculis homeobox homolog 1b
N_isotig01855 ENSDARG00000006112 Ras-related C3 botulinum toxin substrate 1
N_isotig03727 ENSDARG00000034240 Capping protein muscle Z-line, alpha 1
P_isotig01165 ENSDARG00000046004 Capping protein muscle Z-line, beta
P_isotig18441 ENSDARG00000023797 Ryanodine receptor 1b
N_isotig17357 ENSDARG00000019096 Myosin, light polypeptide 7
GLUCOSE METABOLISM
Probe Name Ensembl Acc. Number Gene name
N_contig01740 ENSDARG00000003191 Pyruvate kinase, muscle, b
N_isotig13675 ENSDARG00000004059 Galactokinase
N_isotig03674 ENSDARG00000005161 Glucose phosphate isomerase b
P_isotig13251 ENSDARG00000005423 Phosphoglycerate mutase 1a
P_contig00403 ENSDARG00000011665 Aldolase a, fructose-bisphosphate, a
N_isotig03547 ENSDARG00000014179 Phosphofructokinase, muscle a
P_isotig10593 ENSDARG00000016875 Glycogen synthase 1
P_isotig18039 ENSDARG00000019702 Aldolase c, fructose-bisphosphate
N_isotig03683 ENSDARG00000022456 Enolase 1, (alpha)
N_isotig04393 ENSDARG00000026964 Hexokinase 2
N_isotig06502 ENSDARG00000028088 Galactokinase 1
N_isotig03558 ENSDARG00000030604 Phosphorylase kinase, gamma 1 (PHKG1a)
N_isotig18841 ENSDARG00000039914 Glyceraldehyde-3-phosphate dehydrogenase
P_isotig00860 ENSDARG00000040856 Lactate dehydrogenase A4
P_isotig00400 ENSDARG00000043180 Glycerol-3-phosphate dehydrogenase 1b
N_contig00167 ENSDARG00000054191 Phosphoglycerate kinase 1
N_isotig05258 ENSDARG00000057571 Phosphoglycerate mutase 2 (muscle)
N_isotig12521 ENSDARG00000057630 Aldose 1-epimerase
N_isotig06792 ENSDARG00000060797 Phosphofructokinase, muscle b
P_isotig13923 ENSDARG00000062998 Peptidoglycan recognition protein 2
P_isotig03551 ENSDARG00000070826 2,3-bisphosphoglycerate mutase
N_isotig20169 ENSDARG00000071076 Similar to L-lactate dehydrogenase B chain
HEDGEHOG SIGNALLING PATHWAY
Probe Name Ensembl Acc. Number Gene name
N_isotig03639 ENSDARG00000052131 GLI-Kruppel family member GLI3
N_isotig05619 ENSDARG00000008370 Casein kinase 1, delta a
N_isotig07032 ENSDARG00000005458 Casein kinase 1, gamma 2a
N_isotig10399 ENSDARG00000017803 Glycogen synthase kinase 3 beta (GSK3B)
N_isotig10687 ENSDARG00000034056 Casein kinase 1, gamma 2b
N_isotig12392 ENSDARG00000004965 Bone morphogenetic protein 5
N_isotig15047 ENSDARG00000071107 Wingless-type MMTV integration site family,7Bb (WNT7)
N_isotig19239 ENSDARG00000060397 Hedgehog interacting protein (HiP)
N_isotig20428 ENSDARG00000017230 F-box and WD-40 domain protein 11b (FBXW11)
N_isotig21462 ENSDARG00000014134 Similar to cAMP-dependent protein kinase (PKA C-alpha)
P_isotig04440 ENSDARG00000059125 Protein kinase, cAMP-dependent, catalytic, beta
P_isotig07996 ENSDARG00000060649 Megalin, low density lipoprotein-related protein 2 (LRP2)
P_isotig12515 ENSDARG00000052674 Casein kinase 1, alpha 1
P_isotig16544 ENSDARG00000015554 Zic family member 2
P_isotig17732 ENSDARG00000063230 Bone morphogenetic protein 7b
P_isotig18139 ENSDARG00000068567 Sonic hedgehog-like; Sonic hedgehog a
WNT SIGNALLING PATHWAY
Probe Name Ensembl Acc. Number Gene name
P_isotig22061 ENSDARG00000004305 Vang-like 1 (van gogh, Drosophila)
P_isotig10261 ENSDARG00000007791 Protein phosphatase 2 (formerly 2A), regulatory subunit, beta
P_isotig04271 ENSDARG00000009689 Dishevelled associated activator of morphogenesis 1
P_isotig18727 ENSDARG00000009870 Mitogen-activated protein kinase 8
N_isotig02405 ENSDARG00000013582 Similar to Casein kinase II subunit alpha (CK II)
N_isotig21462 ENSDARG00000014134 Similar to cAMP-dependent protein kinase (PKA C-alpha)
N_isotig04292 ENSDARG00000014571 Catenin, beta 2
N_isotig02225 ENSDARG00000014731 Calcyclin binding protein
N_isotig20428 ENSDARG00000017230 F-box and WD-40 domain protein 11b
N_isotig10399 ENSDARG00000017803 Glycogen synthase kinase 3 beta
P_isotig06163 ENSDARG00000019239 Cullin 1a
N_isotig12285 ENSDARG00000025747 Mitogen-activated protein kinase 10
P_isotig09852 ENSDARG00000027397 Vang-like 2 (van gogh, Drosophila)
AS_isotig13833 ENSDARG00000031894 Lymphocyte enhancer binding factor 1
P_isotig13436 ENSDARG00000038954 Beta-catenin-interacting protein
N_isotig20334 ENSDARG00000039041 Secreted frizzled-related protein 5
P_isotig04697 ENSDARG00000044062 C-terminal binding protein 2
N_isotig16673 ENSDARG00000045444 Frizzled homolog 8a
P_isotig12515 ENSDARG00000052674 Casein kinase 1, alpha 1
N_isotig03709 ENSDARG00000053020 Protein phosphatase 2 (formerly 2A), catalytic subunit A
P_isotig14067 ENSDARG00000057007 C-terminal binding protein 1
P_isotig10768 ENSDARG00000060716 Similar to Serine/threonine-protein kinase PRKX
N_isotig11316 ENSDARG00000060976 CREB binding protein b
N_isotig04935 ENSDARG00000061308 CREB binding protein a
N_isotig15047 ENSDARG00000071107 Wingless-type MMTV integration site family, 7Bb
P_isotig08176 ENSDARG00000075226 Smad4
P_isotig03701 ENSDARG00000077776 Casein kinase 2 beta