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Table 4 Major motifs in the predicted protein kinase domains of Populus LRR-RLKs

From: Genome-wide identification, characterization and expression analysis of populusleucine-rich repeat receptor-like protein kinase genes

Motif

Sequence

Corresponding motif sequence in rice RLK

20

FN/DSN/KYC

 

6

I/lGxGGfGxV Y K/rA/GxL/mx

xxNlI/LGxGgfGxV YKG/axLxxG

9

dGxxVAVKK/rL

xV A V/iKvLxxxx

5

keFxxEv/ixxLgxi/lRHRNL/IVkL

xsFxxEc/vexL/isxv/iRHRN L/iVxL/ixG/txCxxxd

11

yG F CsxxkxxF

 

23

EA/dS/TxQ/nLSxNQ/pS/TS SI/VG

 

19

RA Y/fYy/wskDEKL

 

15

TA/sCSS/GV/IDF/yQ/kGNDFKA

xxGnD/eFKA

4

L VYEY/FM/YxNG S LxxxL

LVYEY/fMpNGSLxxxLHxx

14

xexxxxxL DW

 

3

xRlk/nI/vAxG/dV/aAxG/ALxY LH

LdW/lxxRlxxIAlG/DvvAxG/AxYL H

1

pII/VHRDL/IKS/ps/nN I/VLL Dxd/exeA/ph/kV/i/ls/aDFGL

xI/vv/iHR/cDI/l/vKs/pSNI/VLL D

18

LxxxxdT/SHV/IT/ST

 

13

LLMPDSSNWT S/a

 

25

EA/dS/Txq/n/hl/hSxNQ/pS/TSSI/VG

xssxsGSt/sxxefsxqxExxP

7

xAG T/sxGYxA PE YaxT

xxxxxxxxG T/siGYiA PE Yg/axx

22

xxxxxxxxxgYr/kA/sPExxxxkK/r

xxxxxxG YRAPEvxxxxk/rS/tx

2

eKxDVY SF/yG V/iV/lLL/mELlT/sGK/rxP

Ks/gD VY/fSF/yGV/iV/lL LEllTGK/RxPx

12

xxxdLivxW V/a

xLvxWV/axxxxxxxxx

16

GD L/FISS/ALL/M/sSS/PA/GSS/TSS

 

17

xxxEv/iv/iDPxL/i

xev/iv/lDpxLxxx

21

L/FHT/GAIDKS/PLI/p/lGQ/NG F/yDH/AEI/Ln/i

 

10

P/si/sg/aqh/nT/aLLKDVLD Q/pRL/IP/SP/LPE/kn/ke/ga/l/vAE/dG V

 

24

xxsh/fg/egNSI/es/exn/eK/RV/IECLV/ISI

 

8

lki/v/lA/glxCt/vxxxPxxRPtMxeV/i

lxxvlxl/v/iA/gLx GtxxxPxxR PxMxe

  1. If the bits value of the amino acid at this position is smaller than 0.5, it is represented with x; 1>bits≥0.5, with lowercase; 2>bits≥1, with capital letter; 3>bits≥2, with bold capital; bits>3, with underlined capital letter in bold.