Table 5 Features of sRNAs associated with fungal genes down-regulated during infection
Gene ID/Description | sRNAa | Microarrayb | Signature | Chromosome | Origin | LMg72c | LMg96 c |
|---|---|---|---|---|---|---|---|
MGG_02390.7 conserved hypothetical protein | 14.91 | -1.31 | GCAGGCAGAGGAACACTGAAGCA | 1 | 3’UTR sense | 287 | 0 |
| Â | Â | Â | CTGCAGGGCTGTCTTCTGATGGA | Â | Exon sense | 0 | 162 |
| Â | Â | Â | CTGCAGGGCTGTCTTCTGATGG | Â | Exon sense | 0 | 137 |
|  |  |  | CGGCGACTTAGCTGCCTCTGAACCCGGCTACCAT |  | 5’UTR sense | 0 | 150 |
MGG_06609.7 acetyl-CoA hydrolase | 17.18 | -1.37 | CAAGGAGAGGATTCTGTTGCGATCGCAGT | 4 | Exon sense | 790 | 0 |
MGG_09965.7 conserved hypothetical protein | 0.00 | -1.80 | GAACAGGGCTGGCTTGCCTGACAAC | 4 | 5’UTR sense | 503 | 0 |
MGG_08843.7 magnesium transporter ALR2 | 36.75 | -3.30 | GATGACTTGGAAGTATGAAGCCAGCGTGATGG | 2 | 5’UTR antisense | 395 | 0 |
|  |  |  | AACACGTCGGGAACTCGGGCTA |  | 5’UTR sense | 215 | 0 |
MGG_04696.7 |  |  | CGGTTGGACAGAGTATTCGGCA | 2 | 3’UTR sense | 0 | 175 |
|  |  |  | TCGGTTGGACAGAGTATTCGGCAGTTCGA |  | 3’UTR sense | 0 | 12 |
|  |  |  | TCGGTTGGACAGAGTATTCGGCAG |  | 3’UTR sense | 36 | 0 |
|  |  |  | ATCGGTTGGACAGAGTATTCGGCAGT |  | 3’UTR sense | 0 | 100 |
| Â | Â | Â | TGAAGAAGGTTCTCTGCATGGGT | Â | Exon sense | 108 | 0 |
| Â | Â | Â | TCCAGCTGAAGAAGGTTCTCTGCATGG | Â | Exon sense | 0 | 100 |
| Â | Â | Â | GGCTGACGACTTGAAGAAGCTGAA | Â | Exon sense | 251 | 225 |
| Â | Â | Â | CGGCTGACGACTTGAAGAAGCTGAA | Â | Exon sense | 323 | 262 |
| Â | Â | Â | CATGTCGGCTGACGACTTGAAGAAGCTGA | Â | Exon sense | 0 | 137 |
| Â | Â | Â | CGAGACCGTCGAGCTCCAGATCGGCCT | Â | Exon sense | 0 | 125 |
| Â | Â | Â | CTCGAGACCGTCGAGCTCCAGATCGG | Â | Exon sense | 0 | 137 |
MGG_01991.7 betaine aldehyde dehydrogenase | 12.55 | -1.75 | CAGTGGTCTCGGCACTGAGAACGGT | 1 | Exon sense | 180 | 0 |
| Â | Â | Â | TCAAGTGGTTTCGGTACTACGCAGCT | Â | Exon sense | 36 | 0 |
MGG_06868.7 acetolactate synthase catalytic subunit | 10.42 | -2.02 | GTGGAAGGAGAAGTGGCCTCTGTCACA | 1 | Exon sense | 287 | 0 |
| Â | Â | Â | CAACATGACTCTGACAGAGCTTTCGACGGCG | Â | Exon sense | 467 | 0 |
| Â | Â | Â | ACATGACTCTGACAGAGCTTTCGAC | Â | Exon sense | 0 | 162 |
| Â | Â | Â | AGCCTGACGATGTCGTTGATGCTC | Â | Exon sense | 359 | 0 |
| Â | Â | Â | AGCCTGACGATGTCGTTGATGCT | Â | Exon sense | 610 | 0 |
| Â | Â | Â | TTGTCGGAAGGCGGCGTTGAACTTC | Â | Exon sense | 0 | 87 |
MGG_04428.7 zinc finger transcription factor ace1 | 28.29 | -2.11 | CATGGCTCGCCGCAAGAAGAACG | 2 | Exon sense | 180 | 0 |
| Â | Â | Â | AAGGCCATCTCACTGGCCACTG | Â | Exon sense | 0 | 37 |
MGG_01596.7 DNA damage response protein kinase DUN1 | 18.67 | -3.00 | CAGGCAAGGGCAAGGAACACT | 2 | Exon sense | 251 | 0 |
| Â | Â | Â | AAGGAACACTGAACCGTGGAAC | Â | Exon sense | 215 | 0 |
MGG_04994.7 | Â | Â | CGACTCTGACGACGAGGATGGAAC | 3 | Exon sense | 0 | 237 |
| Â | Â | Â | CAGATCTCCCTGACTGAGAACTGGCT | Â | Exon sense | 287 | 0 |
| Â | Â | Â | CGGTTTCGGTTGGTTCTCTGGCGGCC | Â | Exon sense | 0 | 75 |
| Â | Â | Â | TTCGGTTGGTTCTCTGGCGGCCTCGGC | Â | Exon sense | 36 | 0 |
| Â | Â | Â | GTTGGTTCTCTGGCGGCCTCGGCGAG | Â | Exon sense | 0 | 150 |
MGG_09395.7 | Â | Â | has Tandem repeats on it | 6 | Â | Â | Â |
MGG_06714.7 | Â | Â | CAAGGACAAGTGGGTGTTGAACGACAGC | 1 | Exon sense | 539 | 0 |