Table 1 The lengths and structures of eight characterized H. vulgare MIRNA genes
From: Developmentally regulated expression and complex processing of barley pri-microRNAs
No. | H. vulgare MIRNAgene | Length [bp] | Position of mature miRNA and miRNA* sequences within gene# | Number of exons [length in bp] | Number of introns [length in bp] | Rice (osa)/wheat (tae) orthologues^ |
|---|---|---|---|---|---|---|
1. | 156g | 9759 | 255-275 (intron 1) 349-370* | 6 [126, 116, 68, 83, 145, 513] | 5 [851, 1024, 4666, 76, 2091] | osa-miR156g |
2. | 159b | 1251 | 392-412 (exon 1) 241-261* | 2 [596, 249] | 1 [406] | osa-miR159b |
3. | 166n | 1237 | 359-379 (exon 1) 304-324* | 2 [510, 469] | 1 [258] | osa-miR166n |
4. | 168a-5p/168a-3p | 1004 | 133-153 (exon 1) 180-200* | 2 [261, 502] | 1 [241] | osa-miR168a |
5. | 171e | 1095 | 150-170 (exon 1) 95-115* | 2 [296, 486] | 1 [313] | osa-miR171e |
6. | 397b-3p | 868 | 588-608 (exon 1) 520-540* | 1 [868] | 0 | osa-miR397b |
7. | 1120 | 3606 | 3288-3311 (exon 7) 3238-3260* | 7 [97, 163, 304, 201, 144, 179, 697] | 6 [111, 284, 275, 151, 94, 906] | tae-miR1120 |
8. | 1126 | 3297 | 1242-1264 (intron 3) 1309-1331* | 7 [65, 74, 40, 190, 218, 76, 120] | 6 [150, 203, 1305, 91, 605, 160] | tae-miR1126 |