From: Autotoxicity mechanism of Oryza sativa: transcriptome response in rice roots exposed to ferulic acid
 | Short exposures | Long exposures | |||||
---|---|---|---|---|---|---|---|
Family name | In genome | On array | Detected | Increase a | Decrease | Increase | Decrease |
ATP-dependent | Â | Â | Â | Â | Â | Â | Â |
ATP-binding Cassette (ABC) Superfamily | 130 | 115 | 80 | 17* | 1 | 3 | 0 |
P-type ATPase (P-ATPase) Superfamily | 45 | 42 | 37 | 3 | 0 | 0 | 0 |
Ion channels | Â | Â | Â | Â | Â | Â | Â |
Ammonia Transporter Channel (Amt) Family | 12 | 8 | 7 | 0 | 2 | 0 | 0 |
Annexin (Annexin) Family | 9 | 6 | 6 | 1 | 0 | 1 | 0 |
Glutamate-gated Ion Channel (GIC) Family of Neurotransmitter | 21 | 12 | 10 | 1 | 0 | 1 | 0 |
Major Intrinsic Protein (MIP) Family | 37 | 33 | 24 | 0 | 0 | 0 | 1 |
Secondary transporter | Â | Â | Â | Â | Â | Â | Â |
Amino Acid/Auxin Permease (AAAP) Family | 63 | 52 | 41 | 5 | 0 | 0 | 0 |
Auxin Efflux Carrier (AEC) Family | 19 | 16 | 11 | 2 | 1 | 0 | 0 |
Amino Acid-Polyamine-Organocation (APC) Family | 27 | 22 | 20 | 1 | 0 | 0 | 0 |
Aromatic Acid Exporter (ArAE) Family | 14 | 13 | 6 | 1 | 0 | 1 | 0 |
Arsenite-Antimonite (ArsB) Efflux Family | 3 | 3 | 3 | 1 | 0 | 0 | 0 |
Ca2+:Cation Antiporter (CaCA) Family | 16 | 15 | 13 | 1 | 0 | 0 | 0 |
Chloride Carrier/Channel (ClC) Family | 9 | 9 | 8 | 0 | 1 | 0 | 0 |
Divalent Anion:Na + Symporter (DASS) Family | 7 | 7 | 5 | 1 | 0 | 0 | 0 |
Drug/Metabolite Transporter (DMT) Superfamily | 123 | 106 | 86 | 4 | 1 | 0 | 1 |
K + Transporter (Trk) Family | 7 | 7 | 2 | 1 | 0 | 0 | 0 |
Mitochondrial Carrier (MC) Family | 61 | 59 | 55 | 2 | 0 | 0 | 0 |
Major Facilitator Superfamily (MFS) | 151 | 133 | 103 | 9 | 2 | 1 | 1 |
Multidrug/Oligosaccharidyl-lipid/Polysaccharide (MOP) Flippase Superfamily | 57 | 44 | 34 | 5 | 1 | 0 | 0 |
Monovalent Cation:Proton Antiporter-2 (CPA2) Family | 20 | 18 | 4 | 1 | 0 | 1 | 0 |
Proton-dependent Oligopeptide Transporter (POT) Family | 86 | 74 | 50 | 5 | 0 | 0 | 0 |
Telurite-resistance/Dicarboxylate Transporter (TDT) Family | 9 | 8 | 4 | 0 | 1 | 1 | 0 |
Sulfate Permease (SulP) Family | 14 | 14 | 13 | 1 | 0 | 0 | 0 |
Zinc (Zn2+)-Iron (Fe2+) Permease (ZIP) Family | 18 | 16 | 12 | 2 | 0 | 0 | 0 |