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Table 1 Summary of sequencing and assembly

From: Mining genes involved in the stratification of Paris Polyphyllaseeds using high-throughput embryo Transcriptome sequencing

 

Sequence

Sequencing

 

Total bases

80,978,250

Hight-quality (HQ) reads

369,496

Average HQ reads length

219 ±101(bases)

Contigs

 

Number of contigs

16069

Contigs larger than 500 bases

2451(15.3%)

Average length of contigs

402 ±160 (bases)

Range of contig lengths

88–1778 (bases)

Singletons

 

Number of singletons

31,699

Average length of singletons

237 ±168 (bases)

Range of singleton lengths

50–1146 (bases)

Unigenes

47,768