The developing xylem transcriptome and genome-wide analysis of alternative splicing in Populus trichocarpa(black cottonwood) populations

Table 1 Number of AS genes and events in 20 individuals

Individual	AS gene	A3SS	A5SS	IR	ES
PT02	2972	1209	708	1870	257
PT03	2843	1082	595	2032	227
PT04	4047	1796	1003	3115	358
PT05	3200	1481	837	1782	321
PT06	2950	1340	767	1868	278
PT07	3658	1469	795	3120	331
PT08	3751	1510	894	3074	285
PT09	3833	1548	938	3124	299
PT10	2915	1423	815	1446	247
PT11	2357	893	484	1522	174
PT12	3663	1832	1048	1991	236
PT13	3750	1796	1041	2093	325
PT14	4088	1614	952	3176	488
PT15	4584	2059	1305	3232	416
PT16	3470	1720	1044	1647	306
PT17	4422	1799	1102	3301	388
PT18	4346	2382	1464	2517	336
PT19	4567	2145	1299	3131	451
PT20	4478	2471	1498	2737	355
PT21	3510	1807	1161	1500	402
Total	11232	8963	5545	11175	2219
Fraction¹	27%	32%	20%	40%	8%

¹Fraction of AS genes: 11232 divided by number of annotated genes (40,668). Fraction of AS events: number of each type AS events.

ISSN: 1471-2164