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Table 1 Flower-bud late genes obtained in transcriptomic studies in peach

From: Prediction of components of the sporopollenin synthesis pathway in peach by genomic and expression analyses

Transcript model

Blastx similarity

Number of ESTs

Putative ortholog in Arabidopsis*

Reference*

ppa020321m

Peroxidase

74

At1g44970

[26]

ppa020886m

Protease inhibitor/seed storage/LTP

51

  

ppa008309m

Peroxidase

45

  

ppa003797m

4-coumarate-CoA ligase

19

ACOS5

[8]

ppa006506m

Strictosidine synthase

12

LAP3

[27]

ppa018509m

Protease inhibitor/seed storage/LTP

10

At3g52130

[26]

PpB87

Glycine-rich protein

9

  

ppa017856m

Carboxyl-terminal peptidase

6

  

ppa008548m

Cinnamoyl-CoA reductase

6

TKPR1/DRL1

[11]

ppa019432m

Chalcone synthase

5

LAP6/PKSA

[9, 10]

ppa021373m

Protease inhibitor/seed storage/LTP

4

  

ppa006739m

BURP domain protein

4

  

ppa005767m

BURP domain protein

4

  

ppa005535m

BURP domain protein

4

  

PpB89

Glycine-rich protein

3

  

PpB88

 

3

  

PpB71

DNA-binding protein (AT-hook)

3

At2g42940

[28]

ppa025857m

Protease inhibitor/seed storage/LTP

3

  

PpB79

Cupin

3

  

ppa014645m

Carboxyl-terminal peptidase

3

  

ppa009110m

Chlorophyll A-B binding protein

3

  

ppa008777m

Cinnamoyl-CoA reductase

3

TKPR2/CCRL6

[11]

ppa005633m

Tubulin

3

  

IB153

 

3

  

ppa024968m

 

2

  

ppa021109m

Protease inhibitor/seed storage/LTP

2

  

ppa011965m

Short-chain dehydrogenase/reductase

2

ATA1/TAPETUM1

[13, 29]

ppa009789m

MtN3/saliva family

2

RPG1

[30]

ppa006852m

Chalcone synthase

2

LAP5/PKSB

[9, 10]

PpB91

 

1

  

PpB60

Glucose-methanol-choline oxidoreductase

1

  

ppb012876m

 

1

  

ppa025137m

 

1

  

ppa023338m

Plastocyanin-like

1

  

ppa022178m

PHD Zn-finger protein

1

MS1

[15, 16, 31]

ppa020936m

BURP domain protein

1

  

ppa016810m

Cytochrome P450

1

CYP703A2

[7]

ppa013829m

MazG nucleotide pyrophosphohydrolase

1

  

ppa013711m

Early nodulin 93 ENOD93 protein

1

  

ppa012800m

Protein of unknown function (DUF538)

1

  

ppa011974m

Plastocyanin-like

1

  

ppa010924m

Microsomal signal peptidase subunit

1

  

ppa009350m

Xyloglucan endo-transglycosylase

1

  

ppa008351m

Helix-loop-helix DNA-binding domain

1

AtbHLH91

[13, 17]

ppa005764m

XYPPX repeat protein

1

  

ppa005503m

Ubiquitin-like protein

1

  

ppa004872m

Protein of unknown function (DUF668)

1

  

ppa003411m

Multicopper oxidase

1

  

ppa003039m

ATPase family (AAA)

1

  

IB126

 

1

  
  1. * Arabidopsis genes related to sporopollenin and tapetum development that are putative orthologs of peach genes listed in this table (plus RPG1) are highlighted with their names and references.
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BMC Genomics

ISSN: 1471-2164

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