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Table 1 General statistics of grape V1 annotations and contig assemblies

From: De novotranscriptome characterization of Vitis vinifera cv. Corvina unveils varietal diversity

  Grape V1 annotation Velvet assembly Oases deconvolution CdHit Clustering
Number of sequences 29971 172826 140862 106670
Maximum length 40713 3541 18312 18312
Minimum length 18 200 200 200
Average 1331.07 345.57 1392.25 1307.56
Median 1126 282 1022.36 917
N50 1755 347 2163 2098
N90 738 219 678 607
  1. Assembly was performed with Velvet and Oases. Clustering was carried out using CdHit.