Table 1 The top 20 highly expressed genes by L. intracellularis in the enterocyte cytoplasm
Locus | Gene product | Predicted function | Log2(RPKM) |
|---|---|---|---|
LI0461 | Hypothetical protein | Unknown | 15.0 |
LI0625 | Chaperonin GroEL | Protein folding | 14.9 |
LI1159 | Hypothetical protein | Unknown | 13.7 |
LI0447 | Hypothetical protein | Unknown | 13.6 |
LI0935 | Elongation factor Tu (tufA) | Protein biosynthesis | 13.5 |
LI0624 | Co-chaperonin GroES | Protein folding | 13.5 |
LI0005 | Cu-Zn superoxide dismutase precursor (sodC) | Oxidative stress | 13.3 |
LIC060 | Hypothetical protein | Unknown | 12.9 |
LI0267 | Hypothetical protein | Unknown | 12.8 |
LI1075 | Dioxygenases related to 2-nitropropane dioxygenase | Oxidative stress | 12.7 |
LI0809 | Hypothetical protein | Unknown | 12.5 |
LI0912 | Molecular chaperone DnaK | Protein folding | 12.4 |
LI0439 | Hydrogenase-1 small subunit | Cell metabolism | 12.4 |
LI0902 | Outer membrane protein related to OmpA-OmpF porin | Membrane transport | 12.4 |
LI1158 | Hypothetical protein related to secretion system effector C | Intracellular survival | 12.3 |
LI1005 | Pseudouridine synthase (truB) | Protein biosynthesis | 12.2 |
LI0559 | 50S ribosomal protein L13 | Protein biosynthesis | 12.2 |
LI0697 | Rubrerythrin (rubY) | Oxidative stress | 12.2 |
LI0043 | Hypothetical protein | Unknown | 12.0 |
LIC103 | Methyl-accepting chemotaxis protein (pilJ) | Chemotaxis | 11.9 |