Figure 3

Typical variation of the reads over a homopolymeric repeat at the termination signal of the M-gene displayed as (a) an alignment of individual 454 reads with the consensus sequence (contig00001) and a reference sequence (RV437) and (b) a flowgram with reference sequence (RV437, top panel), read G3FY5P04JF0R0 (middle panel) and the difference between the reference sequence and read (bottom panel).