Table 2 Location of and gene information for SNPs associated (P < 1 × 10 ^-4 ) with meat quality traits

DM_Br

2

Gga_rs14206277

78152161

G/A

0.338

2.01E-05

0.34

0.071

FAM105A

within

DM_Th

14

Gga_rs14086206

14720651

A/G

0.340

8.38E-05

1.40

0.077

TBC1D24

D 20.6

DM_Br

Z

GGaluGA346234

1626487

G/A

0.016

1.16E-05

0.19

0.075

ST8SIA5

within

IMF_Br

1

Gga_rs13878108

65617257

G/A

0.240

6.49E-05

1.09

0.063

MGST1

D 183.1

IMF_Br

3

GGaluGA217414

40654853

A/G

0.116

9.30E-05/2.59E-06

1.56

0.061

NTPCR

U 109.9

IMF_Br

4

GGaluGA255658

43311293

G/A

0.100

3.46E-05/5.61E-09

0.58

0.057

AGA

U 330.8

IMF_Br

5

Gga_rs14524377

27009717

G/A

0.193

5.41E-05

0.91

0.066

TYRO3

U 73.6

IMF_Br

Z

GGaluGA348872

18701354

A/G

0.025

2.14E-05/4.28E-07

0.36

0.059

KIF2A

U 122.3

Meat color

L*

2

GGaluGA137635

23472767

A/G

0.302

7.04E-05

1.18

0.068

COL1A2

U 58.0

L*

18

GGaluGA121429

6990031

C/A

0.412

8.96E-05

1.50

0.065

KPNA2

U 0.2

L*

18

GGaluGA121456

7112093

G/A

0.383

7.19E-05

1.21

0.068

PSMD12

U 34.3

b*

27

Gga_rs15237721

1597620

G/A

0.364

4.85E-05

0.81

0.077

FTSJ3

U 2.4

Skin color

L*

2

GGaluGA159190

99182734

G/A

0.122

7.62E-05

1.28

0.073

PTPN2

U 130.6

L*

13

Gga_rs14058862

10586210

A/G

0.114

9.39E-05

1.57

0.071

SPINK5

U 28.1

L*

13

Gga_rs15697794

11284741

G/A

0.049

9.61E-05

1.61

0.058

CLINT1

U 15.6

L*

21

Gga_rs16180462

3645146

G/A

0.162

8.76E-05

1.47

0.072

PGD

U 62.7

a*

19

Gga_rs15044922

2083895

G/A

0.213

5.10E-05

0.85

0.077

MIR1587

D 301.0

b*

6

GGaluGA305921

33306370

A/G

0.412

3.24E-05

0.54

0.089

BUB3

D 195.5