Figure 6

Avenanthramide and tocol pathways showing homologous transcripts assembled in dnOST for each particular gene. (A) Avenanthramides. Pathway adapted from [25]. (B) Tocols. Colored squares represent individual assembled transcripts. Color code scale is shown at the bottom and is based on the log2 of the RPKD values of each transcript (see materials and methods). CCoA3H: p-coumarate3-hydroxylase; HHT: hydroxycinnamoyl CoA:hydroxy-anthranilate N-hydroxycinnamoyl transferase; CCoAOMT: caffeoyl-CoA 3-O-methyltransferase; HPT: homogentisate phytyltransferase; GGR: geranylgeranyl diphosphate reductase; HPPD: 4-hydroxy-phenylpyruvate dioxygenase HGGT: homogentisate geranylgeranyl transferase; VTE1: 2-methyl-6-phytyl-1,4-benzoquinone cyclase; VTE3: 2-methyl-6-phytyl-1,4-benzoquinone/2-methyl-6-solanyl-1,4-benzo-quinone methyltransferase; VTE4: tocopherol methyltransferase; PDP: phytyl-diphosphate; GGDP: geranylgeranyl- diphosphate; HPP: p-hydroxyphenylpyruvic acid; HGA: homogentisic acid; MPBQ: 2-methyl-6-phytylbenzoquinol; DMPBQ: 2,3-dimethyl-6-phytyl-1,4-benzoquinone; MGGBQ: 2-methyl-6-geranylgeranylbenzoquinol; DMGGBQ: 2,3-dimethyl-5-geranylgeranylbenzoquinol; T: tocopherol; T3: tocotrienol.